Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq222 100 2e-15
seq2105 89.7 3e-12
>seq222
Length=508843
Score = 100 bits (110), Expect = 2e-15
Identities = 120/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 474711 CATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATT 474770
||||||| || ||| |||||| | ||||| || || || ||||| || || |||||
Sbjct 290012 CATATCTGGGTCAAACGGTAACTCAAGCAGTTATCACGGTACCAGCTTACTTCAATGACA 289953
Query 474771 CTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTA 474830
|| ||||||||||| |||||||| || | ||| |||||||| | ||| | |||||
Sbjct 289952 GCCAGCGTCAAGCAACCAAAGATGCAGGTAAAATCGCAGGTCTGGAAGTTCTGCGTATCG 289893
Query 474831 TTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873
| || || ||||||||||| || | || || ||| | || ||
Sbjct 289892 TCAACGAGCCAACAGCAGCAGCTTTGGCATACGGTATGGAGAA 289850
>seq2105
Length=340086
Score = 89.7 bits (98), Expect = 3e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
|| |||||||||||||| || || || || || |||||||| || || || || |||
Sbjct 294156 ACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACAAAGGACGCCGGTCTCATT 294097
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
|| || || || || | ||||| || ||||| ||||| ||||| || |||| || |||
Sbjct 294096 GCTGGCCTCAACGTCCTCCGTATCATCAATGAGCCAACTGCAGCAGCCATTGCCTACGGT 294037
Query 474866 CTTGATAAGAATTCTGA 474882
|| || ||||| ||||
Sbjct 294036 CTCGACAAGAAGACTGA 294020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268027480908476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |