Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq454 91.5 2e-13 >seq454 Length=67831 Score = 91.5 bits (100), Expect = 2e-13 Identities = 164/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 || ||||| ||||| || || ||||| || || || || |||||||||||||| |||||| Sbjct 20452 GCAACACCGATAGGTCCGACACCAGGTCCGCCTCCACCGTGTGGAATACAGAAGGTCTTA 20511 Query 138240 TGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTG 138298 || | || ||||| || ||||| || || || || | ||| | || || | ||| Sbjct 20512 TGCAGGTTCAGATGGCACACATCCGCGCCAATTGT-TCCTGGAGAAGTGAGGCCGATCTG 20570 Query 138299 TGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACA 138358 || || | |||||| ||||| | || ||||| || |||| | || || | | || Sbjct 20571 AGCGTTCATATTTGCGCCATCCATGTAGACCTGCCCGCCATAATGGTGCACAAGATCGCA 20630 Query 138359 TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | || ||| | || ||||| ||||| ||||||||||| || | ||| || Sbjct 20631 GACCTTCTTGACTTCTGGCTCAAACACACCGAACGTCGATGGATACGTTACCATGAT 20687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578972801033240