Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2105 251 9e-62 seq2971 156 6e-33 seq3316 150 2e-31 seq2765 102 1e-16 seq431 102 1e-16 >seq2105 Length=340086 Score = 251 bits (278), Expect = 9e-62 Identities = 476/698 (68%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| ||||||||||| || || || || ||||| || || ||| | | | Sbjct 294582 ATGGCACCAGCAATTGGTATCGACTTGGGTACCACGTACTCTTGCGTGGGTATCTTCAGA 294523 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 ||||||| | ||||| ||| | || || || || ||||| ||||| || || | ||| Sbjct 294522 GATGATCGCATTGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 294463 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| ||||| | || ||||| | || |||||||| || || ||| || |||||| Sbjct 294462 GCCTTCACAGACACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAAC 294403 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || || || ||||| ||||| ||||| | || || |||||||| || | Sbjct 294402 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 294343 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 || |||| || || ||| ||| | | | ||| | || | | |||| ||||| Sbjct 294342 GTGCAAGCAGACATGAAGCACTTCCCCT-TCAAGGTCATCGAGAAG--GCTGGCAAGCCA 294286 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || || || || | || ||| |||| || || | || || || || || | Sbjct 294285 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 294226 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| ||||| || || || | | | ||| || || || | Sbjct 294225 ATGATCCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 294166 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || || || || || || |||| || || || ||||| || ||||||||||| Sbjct 294165 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACAAAGGACGCC 294106 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | ||||| || || ||| || | || |||||||| ||||| || || || ||| Sbjct 294105 GGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAATGAGCCAACTGCAGCAGCCATT 294046 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| | || | || ||||| | ||||| ||||| ||| Sbjct 294045 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 293986 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || |||| || || | ||||| ||||| || ||| | Sbjct 293985 GGTGGTACCTTCGATGTGTCGCTGCTCACAATCGAGGAGGGTATTTTCGAGGTCAAGTCC 293926 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||||||||| ||||| | |||||||| || ||||| Sbjct 293925 ACTGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGA 293888 >seq2971 Length=246349 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || || |||||||||||||||||||| ||||| |||||||| | || | Sbjct 199712 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGATAATGTGAAGAGC 199771 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||||||||||||||| || |||||||| | ||||| || || || Sbjct 199772 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 199831 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || ||||| | || |||||| | || |||||| ||||| || Sbjct 199832 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAT 199891 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 199892 CTCGTCCTCCGTCTTCGTGGTGGT 199915 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || |||||||||||||| |||| Sbjct 199911 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 199970 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || |||| | ||||| || || ||||| || || ||||| | Sbjct 199971 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 200030 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || |||||||| || || ||||| || ||||| ||||| || | || | Sbjct 200031 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACT 200090 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || || || || ||||| ||| | || || | || || |||||| Sbjct 200091 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 200143 >seq3316 Length=588550 Score = 150 bits (166), Expect = 2e-31 Identities = 197/272 (72%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || |||||||||| ||| || |||| || || |||||||||| ||| || Sbjct 136016 ACCGTCCCAGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 136075 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || ||||| || ||||| || || |||||| Sbjct 136076 GCCGGACTCAACGTTCTCCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 136135 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| | || |||||| | |||| ||||| ||||||||| Sbjct 136136 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAATGTCCTCATCTACGATCTTGGTGGTGGT 136195 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | ||| | || ||| | ||| || |||||||| ||| Sbjct 136196 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 136255 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || ||| | |||||| | |||||||| Sbjct 136256 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 136287 Score = 111 bits (122), Expect = 2e-19 Identities = 252/375 (67%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118 ||||| ||||| || | || || || || |||||||| |||||||| || | |||| Sbjct 136467 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 136524 Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178 ||||||| | | || || ||||| | || || || || ||| | || | || | Sbjct 136525 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 136584 Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236 ||||||| ||||| || || | ||| | | || | || | || | || || Sbjct 136585 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 136642 Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 || || || || |||||| || || ||| |||||||| || ||||| ||||| Sbjct 136643 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATTGTGCTTGT 136702 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||||| || || | || || ||||||||| || Sbjct 136703 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 136762 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | | || | |||||||| ||||| || || || || ||||| ||||||||||| Sbjct 136763 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGTGCCGCCGTTCAGGC 136822 Query 196417 TGCTATTCTCTCAGG 196431 | ||| ||||| || Sbjct 136823 CGGTATCCTCTCTGG 136837 >seq2765 Length=312026 Score = 102 bits (112), Expect = 1e-16 Identities = 692/1095 (63%), Gaps = 38/1095 (3%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || || | | | || ||| || | | ||||| || || Sbjct 265064 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 265123 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || || || |||||||||| | || || Sbjct 265124 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 265183 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| ||||| || || || || | || || || || Sbjct 265184 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 265243 Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||||| ||||||| || |||| | ||| ||| || || |||||||||| Sbjct 265244 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTTGGTGGTGGTA 265295 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| | | | | | || ||| | ||||| || |||| || || | Sbjct 265296 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 265355 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA--TGCACGTCTTCTCCGTCATTTGTCTGA 196014 |||| || ||||| |||||||| |||||||| || ||| | | || |||||| | Sbjct 265356 GTGACACCCATCTTGGTGGTGAGGATTTCGACCAGCGTGTCGTGGACTTC-TTTGTC--A 265412 Query 196015 TGAGTTCCGTC-GAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 ||| | | | |||| | | | ||||| | || | | | || | || || Sbjct 265413 AGAGCTACAACAAAAAGCACGATACCGATATCACGAAGAACGCGAAGACTATGGGTAAGC 265472 Query 196074 TTAGGACTGCATGT-GAACGTGCCAAACGAACTCTCTCTT-CTACGGCTCAAACAATGGT 196131 | | | || | || || ||||| || | || |||| | | || | ||| | | Sbjct 265473 TGAAGCGTG-AGGTCGAGAAGGCCAAGCGCGCCCTGTCTTCCCAGATGTCCACCAA-GAT 265530 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTT 196191 || ||||| | || || || | ||||||| ||| ||||||| || || Sbjct 265531 CGAAATTGAGGCATTCCACGAGGGCACCGACTTCTCCGAGACTCTTACCCGCGCCAAGTT 265590 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 || ||| | || || |||| | |||| | | || ||||| ||||| || Sbjct 265591 CGAGGAGCTCAATAACGACCTGTTCAAGAAGACCCTCAAGCCAGTTGAGCAAGTGCTCAA 265650 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 ||||| ||| | | ||| | | | ||||| ||||| || || || || || || || Sbjct 265651 GGACGCCAAGCTCAAGAAGAGTGACATCGATGACATTGTTCTCGTCGGTGGCTCTACTCG 265710 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAA 196369 |||||| ||| | || |||| || || ||||||| || || | | ||| Sbjct 265711 TATTCCCAAGGTCCAGGCCATGC--TCGAGGACTTCTTCGGCAAGAAGG---CCAGCAAG 265765 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 |||||||| ||||| || || ||||| || || || ||||||| || | ||||||| Sbjct 265766 GGCATCAACCCCGATGAGGCTGTCGCTTACGGCGCTGCTGTTCAGGGTGGTGTTCTCTCC 265825 Query 196430 GGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG-TATCCCT 196488 || | || | | ||| ||||| |||| | || | | ||||| | |||| Sbjct 265826 GGCGAGGAGCA----GGCTTCCGAGATC--GTGCTCATGGACG-TCAACCCGCTCACCCT 265878 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCC 196548 ||| | || || | || ||||| ||||| | | || | | || || ||||| Sbjct 265879 GGGCATCGAGACCACCGGCGGTGTCATGACCCACCTGATCAAGCGTGGTACCACCATTCC 265938 Query 196549 GACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCA 196608 || |||||| || |||| || || |||| || || |||| || | |||||| Sbjct 265939 TACCAAGAAGAGCCAGATCTTCTCGACTGCCGCCGACAACCAGCCAGTGGTACTTATTCA 265998 Query 196609 AGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 || | |||||| ||||||||| |||| || ||| | | ||||| | ||||| | Sbjct 265999 GGTCTTTGAAGGTGAACGCTCCATGACAAAAGACAACAACCAGCTTGGCAAGTTCGAGCT 266058 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 | || ||||| | || || | || || || ||| | || |||||| | || Sbjct 266059 TTCCGGTATTCCTCCCGCTCCTCGCGGCCAGCCTCAAATTGAGGTCACCTTCGAGCTCGA 266118 Query 196729 CGCAAATGGAATTCT 196743 |||||| || ||||| Sbjct 266119 CGCAAACGGCATTCT 266133 >seq431 Length=68848 Score = 102 bits (112), Expect = 1e-16 Identities = 254/382 (66%), Gaps = 8/382 (2%) Strand=Plus/Plus Query 198573 GGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTC 198632 ||| | |||||||| ||||||||| | || ||||||||| | || ||||| || |||| Sbjct 47507 GGTCCTCCGGGTACAGGTAAAACCTTGCTCGCTCGTGCTGTTGCCGGTGAGGCGGGTGTA 47566 Query 198633 CCCTTTCTTCAGTGCT-CCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAA 198691 || || |||||| | ||| | ||| | || ||||| || ||||| ||||| Sbjct 47567 CCATT-CTTCAGCATTTCCGGTTCTGACTTCGTTGAAATGTTTGTCGGTGTCGGTGCATC 47625 Query 198692 GCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGA 198751 || || || || | ||||| | || |||| |||||||||||||| || || Sbjct 47626 TCGTGTACGTGACTTGTTTGAAAATGCGAAGAAAAACGCCCCATGTATCATCTTTATCGA 47685 Query 198752 TGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCG 198811 ||| ||||| || || || ||||||||| | | |||| | || || || Sbjct 47686 TGAAATTGATGCGGTAGGACGTCAGCGTGGTGCTGGTCTTGGTGGTGGTCACGACGAACG 47745 Query 198812 TGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTT---TGACAATGAGACTGG 198868 ||| || || | |||||| | ||| ||| ||||||||||| | |||||| || Sbjct 47746 TGAACAAACACTCAACCAGTTGCTCGTTGAAATGGATGGTTTCGGAGCCAATGA---AGG 47802 Query 198869 TATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCC 198928 ||| | | |||| ||||| || | || || || || ||| |||| ||||| Sbjct 47803 TATTATCATCGTTGCAGCTACGAACCGTGCAGACATTCTGGACCCTGCCTTGCTGCGTCC 47862 Query 198929 CGGTCGATTCGACCGTAAGATT 198950 || || || |||||| | ||| Sbjct 47863 AGGACGTTTTGACCGTCAAATT 47884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657833314258640