Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq564 147 6e-30
seq320 123 7e-23
seq3227 105 2e-17
seq431 93.3 1e-13
seq442 86.0 2e-11
>seq564
Length=57547
Score = 147 bits (162), Expect = 6e-30
Identities = 555/865 (64%), Gaps = 7/865 (1%)
Strand=Plus/Minus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||||| ||||| |||||||||||||| | |||||||||||| || | |
Sbjct 6960 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 6901
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || |||||||| |||||| | || || || ||||| |||| || || |||||
Sbjct 6900 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 6841
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| | | | ||| || || | ||||||| |||||| |
Sbjct 6840 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 6781
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|||||| | | || |||||||| ||| ||| |||||||| | | ||||
Sbjct 6780 TCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGG 6721
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938
|| | || | |||| | || | | | ||||||| |||||| | ||| |||
Sbjct 6720 CACATTAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 6662
Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998
| ||| ||||| | || | || || || | || || ||||| || || ||
Sbjct 6661 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 6602
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055
| ||| | | | || | || ||||| || || || |||||| ||| |
Sbjct 6601 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 6542
Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115
| | ||||||||||| || || || || ||||| || ||| |||| | |||||| || |
Sbjct 6541 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 6482
Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175
|| ||| ||||| ||||| || || |||| ||| | || || | | | | || ||
Sbjct 6481 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTG 6422
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
|| ||| || |||||||| || | || || || || ||| ||| | || |
Sbjct 6421 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTC 6362
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
| | ||||| ||||| ||||| | ||| | | | |||| || || || |
Sbjct 6361 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 6302
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|||| || ||||| |||| ||||| || | ||||| | || ||||| |||||
Sbjct 6301 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 6242
Query 156356 ATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414
|| | ||||||||| | || | |||| | ||||||||| | || || || |
Sbjct 6241 GTAGTTGTATGTCTCGAT-CGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACAC 6183
Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474
||| ||| || || || | ||| ||| | |||||||||| |||||||||| |
Sbjct 6182 GCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATC 6123
Query 156475 GTTCCAGAGTTTTAAACCCGAAATA 156499
| |||||||| || || ||||| ||
Sbjct 6122 GCTCCAGAGTCTTGAAGCCGAAGTA 6098
>seq320
Length=82377
Score = 123 bits (136), Expect = 7e-23
Identities = 174/241 (72%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622
||||| | ||||||| | ||| | || ||||||||| || |||||||| | ||
Sbjct 41753 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 41812
Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682
|| ||||| |||||||| ||||| ||||||||||||| || |||||||| | |||||
Sbjct 41813 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 41872
Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740
||| || |||| | | | | ||| |||| |||||||| || | | ||||| | ||
Sbjct 41873 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCGAGATGCAGGCGAGTAGT 41930
Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800
|| ||||| ||| || |||||| | || || ||||| | |||| |||||| || |
Sbjct 41931 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 41990
Query 302801 C 302801
|
Sbjct 41991 C 41991
>seq3227
Length=177096
Score = 105 bits (116), Expect = 2e-17
Identities = 115/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| ||||| ||||||||| |||||| || || || |||||||| ||||| ||| | ||
Sbjct 153064 TGAGCGATTGTCATACGAGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 153123
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || ||||| ||||| || | || || ||| || | |||| || ||||| ||
Sbjct 153124 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 153182
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| ||||||||||||||
Sbjct 153183 TCCGTGACGAGATGCAAACTTATCACCAAT 153212
>seq431
Length=68848
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|| || ||||||||||| || || || || | ||| || | |||| ||||| || ||
Sbjct 47703 CCTACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCA 47644
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| || || | |||||| ||||| || | ||| ||| ||||||| || || |||||| ||
Sbjct 47643 AACAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCG 47584
Query 289150 GATA-CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| | |||| ||||| |||| || || || || || || | || || | || ||
Sbjct 47583 GAAATGCTGAA-GAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTT 47525
Query 289209 ACCTGTTCCAGGTGGTCC 289226
|||||| || || || ||
Sbjct 47524 ACCTGTACCCGGAGGACC 47507
>seq442
Length=68815
Score = 86.0 bits (94), Expect = 2e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || ||||
Sbjct 4268 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 4209
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687
||||||| ||||| | |||||| ||||||| |||||||| ||||| |||||
Sbjct 4208 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 4154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471750900445969
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |