Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq564 147 6e-30 seq320 123 7e-23 seq3227 105 2e-17 seq431 93.3 1e-13 seq442 86.0 2e-11 >seq564 Length=57547 Score = 147 bits (162), Expect = 6e-30 Identities = 555/865 (64%), Gaps = 7/865 (1%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||||| ||||| |||||||||||||| | |||||||||||| || | | Sbjct 6960 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 6901 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| |||||| | || || || ||||| |||| || || ||||| Sbjct 6900 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 6841 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | ||| || || | ||||||| |||||| | Sbjct 6840 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 6781 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 |||||| | | || |||||||| ||| ||| |||||||| | | |||| Sbjct 6780 TCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGG 6721 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938 || | || | |||| | || | | | ||||||| |||||| | ||| ||| Sbjct 6720 CACATTAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 6662 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 | ||| ||||| | || | || || || | || || ||||| || || || Sbjct 6661 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 6602 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055 | ||| | | | || | || ||||| || || || |||||| ||| | Sbjct 6601 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 6542 Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 | | ||||||||||| || || || || ||||| || ||| |||| | |||||| || | Sbjct 6541 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 6482 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 || ||| ||||| ||||| || || |||| ||| | || || | | | | || || Sbjct 6481 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTG 6422 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 || ||| || |||||||| || | || || || || ||| ||| | || | Sbjct 6421 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTC 6362 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | | ||||| ||||| ||||| | ||| | | | |||| || || || | Sbjct 6361 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 6302 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 |||| || ||||| |||| ||||| || | ||||| | || ||||| ||||| Sbjct 6301 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 6242 Query 156356 ATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414 || | ||||||||| | || | |||| | ||||||||| | || || || | Sbjct 6241 GTAGTTGTATGTCTCGAT-CGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACAC 6183 Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474 ||| ||| || || || | ||| ||| | |||||||||| |||||||||| | Sbjct 6182 GCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATC 6123 Query 156475 GTTCCAGAGTTTTAAACCCGAAATA 156499 | |||||||| || || ||||| || Sbjct 6122 GCTCCAGAGTCTTGAAGCCGAAGTA 6098 >seq320 Length=82377 Score = 123 bits (136), Expect = 7e-23 Identities = 174/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| | ||||||| | ||| | || ||||||||| || |||||||| | || Sbjct 41753 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 41812 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| ||||||||||||| || |||||||| | ||||| Sbjct 41813 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 41872 Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740 ||| || |||| | | | | ||| |||| |||||||| || | | ||||| | || Sbjct 41873 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCGAGATGCAGGCGAGTAGT 41930 Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800 || ||||| ||| || |||||| | || || ||||| | |||| |||||| || | Sbjct 41931 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 41990 Query 302801 C 302801 | Sbjct 41991 C 41991 >seq3227 Length=177096 Score = 105 bits (116), Expect = 2e-17 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || ||||| ||||||||| |||||| || || || |||||||| ||||| ||| | || Sbjct 153064 TGAGCGATTGTCATACGAGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 153123 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| || | || || ||| || | |||| || ||||| || Sbjct 153124 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 153182 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| |||||||||||||| Sbjct 153183 TCCGTGACGAGATGCAAACTTATCACCAAT 153212 >seq431 Length=68848 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || || ||||||||||| || || || || | ||| || | |||| ||||| || || Sbjct 47703 CCTACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCA 47644 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || || || | |||||| ||||| || | ||| ||| ||||||| || || |||||| || Sbjct 47643 AACAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCG 47584 Query 289150 GATA-CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || | |||| ||||| |||| || || || || || || | || || | || || Sbjct 47583 GAAATGCTGAA-GAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTT 47525 Query 289209 ACCTGTTCCAGGTGGTCC 289226 |||||| || || || || Sbjct 47524 ACCTGTACCCGGAGGACC 47507 >seq442 Length=68815 Score = 86.0 bits (94), Expect = 2e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632 ||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || |||| Sbjct 4268 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 4209 Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 ||||||| ||||| | |||||| ||||||| |||||||| ||||| ||||| Sbjct 4208 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 4154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471750900445969