Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq1120 87.8 2e-12 seq3027 86.0 7e-12 seq2939 86.0 7e-12 seq2872 84.2 2e-11 >seq1120 Length=31007 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 ||||| ||||||| ||||||||||||| || | ||||||| | || ||||||| |||||| Sbjct 173 ACGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAA 232 Query 148190 ATCCTGCCACCCCGATTT 148207 ||| || || |||||||| Sbjct 233 ATCGTGTCATCCCGATTT 250 >seq3027 Length=236980 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190 |||| ||||||| ||||||||||||| || | ||||||| | || ||||||| ||||||| Sbjct 236448 CGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAAA 236389 Query 148191 TCCTGCCACCCCGATTT 148207 || || || |||||||| Sbjct 236388 TCGTGTCATCCCGATTT 236372 >seq2939 Length=251760 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190 |||| ||||||| ||||||||||||| || | ||||||| | || ||||||| ||||||| Sbjct 251413 CGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAAA 251354 Query 148191 TCCTGCCACCCCGATTT 148207 || || || |||||||| Sbjct 251353 TCGTGTCATCCCGATTT 251337 >seq2872 Length=271093 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 ||||| ||||||| ||||||||||||| || | ||||||| | || ||||||| |||||| Sbjct 636 ACGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAA 695 Query 148190 ATCCTGCCACCCCGAT 148205 ||| || || |||||| Sbjct 696 ATCGTGTCATCCCGAT 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549598099819640