Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq1120 87.8 2e-12
seq3027 86.0 7e-12
seq2939 86.0 7e-12
seq2872 84.2 2e-11
>seq1120
Length=31007
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189
||||| ||||||| ||||||||||||| || | ||||||| | || ||||||| ||||||
Sbjct 173 ACGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAA 232
Query 148190 ATCCTGCCACCCCGATTT 148207
||| || || ||||||||
Sbjct 233 ATCGTGTCATCCCGATTT 250
>seq3027
Length=236980
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190
|||| ||||||| ||||||||||||| || | ||||||| | || ||||||| |||||||
Sbjct 236448 CGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAAA 236389
Query 148191 TCCTGCCACCCCGATTT 148207
|| || || ||||||||
Sbjct 236388 TCGTGTCATCCCGATTT 236372
>seq2939
Length=251760
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190
|||| ||||||| ||||||||||||| || | ||||||| | || ||||||| |||||||
Sbjct 251413 CGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAAA 251354
Query 148191 TCCTGCCACCCCGATTT 148207
|| || || ||||||||
Sbjct 251353 TCGTGTCATCCCGATTT 251337
>seq2872
Length=271093
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189
||||| ||||||| ||||||||||||| || | ||||||| | || ||||||| ||||||
Sbjct 636 ACGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAA 695
Query 148190 ATCCTGCCACCCCGAT 148205
||| || || ||||||
Sbjct 696 ATCGTGTCATCCCGAT 711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549598099819640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |