Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_021558.1 Length=37644 Score E Sequences producing significant alignments: (Bits) Value seq2873 187 6e-43 >seq2873 Length=797338 Score = 187 bits (206), Expect = 6e-43 Identities = 254/350 (73%), Gaps = 7/350 (2%) Strand=Plus/Plus Query 23253 AAGGAGGA-ATCACATTGCTGAATCGTACAATTCTTATCGGGCGTTTAACCCGCGATCCA 23311 ||||||| || |||||| |||| ||| ||||| ||||| || |||||||| ||||| Sbjct 33742 AAGGAGGGGATTACATTGTTGAACCGTGTCATTCTGATCGGCCGGTTAACCCGGGATCCT 33801 Query 23312 GAATTGAAATATACACCTTCCGGGGTGGCTGTCACCGTCTTTACACTTGCTGTAGATAGA 23371 || ||| ||||| || | || || || || || ||||| | || || || ||| Sbjct 33802 GAGTTGCGTTATACTCCAGCTGGAGTAGCAGTTACGCAATTTACTTTGGCAGTGGACAGA 33861 Query 23372 CCTTTTACAAATAACGG---AGAGCGTGAAGCGGATTTTATTCCCATCGTTGTTTGGAGA 23428 || ||||||| | || ||| || ||||||||||| ||||| |||| |||||| Sbjct 33862 CCGTTTACAAGCCAAGGGGGAGAACGGGAAGCGGATTTCATTCCGGTCGTAACCTGGAGA 33921 Query 23429 CAACTCGCAGAGACGTGCGCCACATATTTACGGAAAGGCCGCCTAACTGCTGTAGAAGGA 23488 || || || ||||| || || | || || || ||||| |||||| |||| || |||||| Sbjct 33922 CAGCTTGCTGAGACTTGTGCAAACTACTTGCGCAAAGGACGCCTAGCTGCAGTCGAAGGA 33981 Query 23489 CGAATTCAAACTCGTAACTATGAAAATAACGAAGGGCGAAGAATTTACGTGACAGAAGTT 23548 || |||||| || || || || ||||||||||| | | | |||||||| ||||| Sbjct 33982 CGCATTCAAGTACGGAATTACGAGAATAACGAAGGAAAACGTGTATACGTGACCGAAGTC 34041 Query 23549 GTAGCAGATAACGTCCGATTCTTGGAAT-AG--AATAGAGATAACAACGG 23595 | || ||||||||||| |||||||| | || || | ||||| ||||| Sbjct 34042 ATTGCCGATAACGTCCGTTTCTTGGAGTCAGCTAACCGTGATAATAACGG 34091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120334145527964