Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq2229 89.7 8e-13 seq1407 89.7 8e-13 seq1140 89.7 8e-13 seq1440 87.8 3e-12 >seq2229 Length=332 Score = 89.7 bits (98), Expect = 8e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 |||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 332 GCCGGTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT 273 Query 120288 CCTGATGCCGGCACCAT 120304 ||| ||||||||||| Sbjct 272 CCTCTCGCCGGCACCAT 256 >seq1407 Length=634 Score = 89.7 bits (98), Expect = 8e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 |||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 165 GCCGGTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT 106 Query 120288 CCTGATGCCGGCACCAT 120304 ||| ||||||||||| Sbjct 105 CCTCTCGCCGGCACCAT 89 >seq1140 Length=804 Score = 89.7 bits (98), Expect = 8e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 |||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 376 GCCGGTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT 435 Query 120288 CCTGATGCCGGCACCAT 120304 ||| ||||||||||| Sbjct 436 CCTCTCGCCGGCACCAT 452 >seq1440 Length=381215 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 |||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 268 GCCGGTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT 327 Query 120288 CCTGATGCCGGCACCA 120303 ||| |||||||||| Sbjct 328 CCTCTCGCCGGCACCA 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825880284153480