Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2906 150 3e-30
seq963 138 2e-26
seq3470 120 5e-21
seq3216 118 2e-20
seq564 89.7 8e-12
seq553 86.0 1e-10
>seq2906
Length=268396
Score = 150 bits (166), Expect = 3e-30
Identities = 176/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| |||
Sbjct 10245 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 10186
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| ||||||| |||||||| ||||| | ||| || |||||| || |
Sbjct 10185 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 10127
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| | | ||| |||| ||||||||||| || |||||||
Sbjct 10126 CAGCGAGCTTGGATGCCTCGGTTGCAACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 10067
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| ||||| | ||||||||| || ||| ||||| ||||||||||| ||
Sbjct 10066 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 10012
>seq963
Length=36175
Score = 138 bits (152), Expect = 2e-26
Identities = 322/481 (67%), Gaps = 6/481 (1%)
Strand=Plus/Minus
Query 2018914 TCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACG 2018973
|||| || | |||||||||||||| | ||||||||||| || |||||| |
Sbjct 30864 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 30805
Query 2018974 CCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGG 2019033
|| | | |||||| | ||| || ||||||||||| || | | | |||
Sbjct 30804 CCATCGAACGCCTCAAAATCATCGCCAAAGATGGCAACATGCCACACGTAATCATCTCGG 30745
Query 2019034 GCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCG 2019093
|| |||||| | ||||| ||||| || ||||| |||||| ||||| ||
Sbjct 30744 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGTC 30685
Query 2019094 CGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCG 2019153
| ||| | | || ||||| ||||||||||| || || ||||||||||| | |||||||
Sbjct 30684 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCCGACGAGCGCGGAATCGACGTCG 30625
Query 2019154 TGCGTAGAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCA 2019211
| || | |||||| || || ||| ||||| || || || |||| || ||
Sbjct 30624 TACGAAACCGCATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCA 30567
Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271
||| | | || | || || || || || | || || | || |||||||| || ||
Sbjct 30566 GAAGATTGTAATTTTAGACGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCG 30507
Query 2019272 ATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGT 2019330
||| || ||||||| |||| || |||||| || || || | || |||||| |||
Sbjct 30506 -TCGAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGA 30448
Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCG 2019390
| ||||||| | ||||| || ||||| ||||| |||| ||||| |||||||
Sbjct 30447 ACAAAATCATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCG 30388
Query 2019391 A 2019391
|
Sbjct 30387 A 30387
>seq3470
Length=143118
Score = 120 bits (132), Expect = 5e-21
Identities = 181/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| |||||||| || ||| |||||| |||||||||||||| | |
Sbjct 116792 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 116851
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || |||||| | ||| ||||||| | |||| ||||| | ||||
Sbjct 116852 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 116911
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | || ||||| |||||||||||||||||||| || |||||||| | |||||||
Sbjct 116912 GTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 116971
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | ||| || || | || | | ||||| | ||| ||| ||||||||
Sbjct 116972 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCT 117031
Query 794131 CG---ATGATGATCTGC 794144
|| |||||| |||||
Sbjct 117032 CGGTAATGATGCTCTGC 117048
>seq3216
Length=178887
Score = 118 bits (130), Expect = 2e-20
Identities = 104/130 (80%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||||||||||||| | || |||||| | || ||||| | || |||
Sbjct 20328 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 20269
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || |||
Sbjct 20268 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 20209
Query 2035752 ATCAAGTACG 2035761
|| || |||
Sbjct 20208 ATTCAGAACG 20199
>seq564
Length=57547
Score = 89.7 bits (98), Expect = 8e-12
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661
||||||| || || ||||| | | ||| || || | ||| |||||||| ||| |||
Sbjct 7583 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 7524
Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721
| ||| | |||| | ||||| ||||||||| |||| ||| || ||||| ||||
Sbjct 7523 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 7465
Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780
||||| ||||||||||||| |||| || | || | || || || ||| |||||||
Sbjct 7464 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 7406
Query 2069781 CCAGCGGCCG 2069790
|||| || ||
Sbjct 7405 CCAGAGGTCG 7396
>seq553
Length=474549
Score = 86.0 bits (94), Expect = 1e-10
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369
|||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| ||||
Sbjct 423673 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 423614
Query 2175370 CATAGGCGCGCATGA 2175384
||||||||||||||
Sbjct 423613 GATAGGCGCGCATGA 423599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915870153177743
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |