Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_022761.1
Length=146193
Score E
Sequences producing significant alignments: (Bits) Value
seq3027 84.2 2e-11
>seq3027
Length=236980
Score = 84.2 bits (92), Expect = 2e-11
Identities = 321/491 (65%), Gaps = 35/491 (7%)
Strand=Plus/Plus
Query 36685 ACGCATGGATCTTGTTAAGAAAGCATATTGGGTTCTCAGTAATCTTTACATTACTGTAGC 36744
||| |||||||| |||||| |||| || |||| | || || | ||||| || | |||
Sbjct 11556 ACGTATGGATCTCGTTAAGGAAGCTTACTGGGCAATGAGCAACATGTACATGACAGCAGC 11615
Query 36745 TACACCCACAATGGGGAATGCAGGTAGACCAGATGGTCAGTTAAG-CTCG---TGTTTCA 36800
|||||| || ||| ||||| || | | || ||| | | || ||| || ||||
Sbjct 11616 TACACCTACGATGTCCAATGCGGGCAAAAAAG-TGGCCGGACAACTCTCCAGCTGCTTCA 11674
Query 36801 TTGGAACAGTAGAAGATTCCCTAGACAATATCTATGATAATAACAAAGATTCAGCTATGG 36860
||| || || || |||||||| || |||| ||| |||| ||| ||| |
Sbjct 11675 TTGATACCGTGGACGATTCCCTTGAGGGCATCTTCGATTCCAACACTGATGTAGC----G 11730
Query 36861 TGTCTAAGT----TTGGTGGGGGTATCGGGGTTTACATGGGTAAAATCCGTTCACTCAAC 36916
|||| || | || || || ||||| |||||| | |||||| || | | | |
Sbjct 11731 CGTCTCAGCAAAATGGGCGGCGGCATCGGCGTTTACCTCGGTAAAGTCAGAGCTCGCG-- 11788
Query 36917 AGTT---ACATCCGTGGTATGAAAGGTA-AGTCTCAAGGTGTTATCCCTTGGAT---CAA 36969
||| ||||||| ||| ||| || | ||| || || ||||||||||| | |
Sbjct 11789 -GTTCGGACATCCGGGGTCACAAAAATACAAGCTCT-GGCGTAATCCCTTGGATTCGCCA 11846
Query 36970 AGGGCTTGAAAATACAGCAAATAGTGTAGACCAGCTAGGTCAGCGTAAAGGTGCTATTGC 37029
| || | ||||| || || ||||||||||| || ||||||||||| || ||
Sbjct 11847 A---CTAAATAATACTGCGGTCAGCGTAGACCAGCTTGGAACACGTAAAGGTGCGATCGC 11903
Query 37030 AGTTTACCTAGACATCTGGCATAAGGATGTTATGGAATTCCTGCAAATTGGTACT-AATA 37088
||||| || ||| | | || || || | ||| ||||| | | || || || |
Sbjct 11904 CGTTTATCTGGACGTTTTCCACAAAGACATCTTGGCCTTCCT-CGATCTGAAGCTCAACA 11962
Query 37089 ACGGGGATGA---GAGACGTAAAGCACGTGACGTATTCCCAGGCTTATGTGTACCAGACC 37145
| || || || || ||| || | ||||||||||| ||| | || | || ||||
Sbjct 11963 ATGGTGACGAGCGGATGCGT---GCGCATGACGTATTCCACGGCATCTGCCTGCCTGACC 12019
Query 37146 TTTTCATGGAG 37156
| |||||||||
Sbjct 12020 TGTTCATGGAG 12030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467668922273560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |