Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_022767.1 Length=81656 Score E Sequences producing significant alignments: (Bits) Value seq3027 152 3e-32 >seq3027 Length=236980 Score = 152 bits (168), Expect = 3e-32 Identities = 407/615 (66%), Gaps = 28/615 (5%) Strand=Plus/Minus Query 63341 CGAAGTATTCACCTGTTTCCCATTCAGAACCTTCGAATAATGGATATTCTTCTTTCTCTT 63400 ||||||||| ||||||| ||| || ||||||| |||| ||||| | | |||| || | Sbjct 12820 CGAAGTATTTGCCTGTTTGCCAATCGGAACCTTGGAATTTCGGATAATGTCCTTTTTCCT 12761 Query 63401 TCGCCAATTTCATACTAGCTTTGATGGTATAATAAGCAATATCTTCGTACAAACTATCGT 63460 | | || || ||| || ||||| | | ||| ||| | ||| |||| | |||||| Sbjct 12760 TGGACAGTTCCATGCTGGCTTTCACGAGCAGATAGTTAATTTTTTCATACAGATTATCGT 12701 Query 63461 TAAAATCTACTGCTTCTTGTGTTTCCCATCTGATCTTTTTCTGAACAAGTAGATCGTGTA 63520 || | |||||||||| | |||||| | || || || |||| || | || | Sbjct 12700 TATATGTGACTGCTTCTTCCGATTCCCAACGAATGCCTTCGAGAGCAAGCAGGTGATGGA 12641 Query 63521 GACCATATGTTCCTAAACCAATAGCACGGTAACGTTTGTTAGTGTATT----TAGCAACA 63576 | || ||||||| | ||||| |||||||| | |||| ||||||| | ||| || Sbjct 12640 GTCCGAATGTTCCCAGACCAACCGCACGGTATTGGCTGTTGGTGTATTGGGCTTGCAGCA 12581 Query 63577 GCTAAAGGTAAATCGTTAAGATCGATAACGTTATCCAGCATACGAACCTGGATGTTAATT 63636 | || || ||| | ||||| ||||| || |||||||||||||| || | Sbjct 12580 CTTCAATGTT----GTTGATGTCGATTACGTTGTCTAGCATACGAACCTGAATCGGTACC 12525 Query 63637 AATCGTTCTAACACATCATCAGTAACAGCACGAGCTAAGTTAATGGAAGACAAGTTACAT 63696 | || || || ||||||| || || ||||| || |||| |||||| || || ||| Sbjct 12524 AGACGCTCCAATACATCATGAGGCACGGCACGTGCCAAGTGAATGGAGTTCAGATTGCAT 12465 Query 63697 ACTACCATATCACCTAATACTTT----TTCTTGAGTC--GAACGGCC-TGTTT--TT--- 63744 ||||| | ||| || ||||| || || | | | || | ||| || Sbjct 12464 ACTACGAAATCGCCCGGCACTTTGGAAATCACGATGCGGGTTTGTCCATCTTTGGTTACG 12405 Query 63745 AGGTCTAATTTTTCATCAAGGTAATAAGTTTGTGATTGGTTTTGTGTAATTTCTGTACAT 63804 || ||| |||||| | | ||| |||||||| || | ||||| ||||| Sbjct 12404 AGCTCTTCCTTTTCAACTA------CCGTTGCAGATTGGTTCTGCATGATTTCAGTACAA 12351 Query 63805 AAGTTAGAGCAGTAAATCATACC-TTTATGTTTTTGTGAGTTCTCACGGTTAACTTGGTC 63863 | ||| || |||| | ||| || | | || || || ||| |||||| || || Sbjct 12350 AGGTTGGAAGAGTACACCATGCCGTGTGCATTGTTCGGA-TTCGAACGGTTGACGGTATC 12292 Query 63864 ACGATAGAACATATATGGTGTACCTGTTTCCAATTGAGAACGCATGATACCCTTCATAAT 63923 || |||||||| || || ||||||||||||| ||| || ||||| || ||||| || Sbjct 12291 CCGGTAGAACATGTAAGGCGTACCTGTTTCCAGTTGGGACTTCATGACACGTTTCATGAT 12232 Query 63924 GTCAATAGCAGGAAC 63938 |||||| || |||| Sbjct 12231 GTCAATCGCCTGAAC 12217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261163141506169