Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq2217 141 9e-29 >seq2217 Length=1057156 Score = 141 bits (156), Expect = 9e-29 Identities = 395/593 (67%), Gaps = 21/593 (4%) Strand=Plus/Plus Query 90323 GCTGCGGACTGGTCTAAACCAGACGATGACTTTACACAGATGTTTTACAACCAGAATGTC 90382 |||| | ||||| | | |||| ||||| || |||| ||||| | || |||||| | Sbjct 519204 GCTGTGAACTGGAATCGAGCAGATGATGATTTCACACTCATGTTCTGGAATCAGAATATT 519263 Query 90383 AAACAGTTCTGGCTCCCAGAAGAAATTGCCCTTAACGG-TGACTTGCTTACTTGGAAGAA 90441 | || || ||| | || || ||| || ||| | | ||| | || ||| | Sbjct 519264 ATGCAATTTTGGACCGATGACGAGATT-CCTTTATCCGATGATAAAATGACCTGGGGCAT 519322 Query 90442 TCTTAGTG-TACAGGAACAAGATACTTATATGAAGGTTCTGGCTGGTCTTACATTACTAG 90500 || |||| ||||| || |||| |||||||||| ||| ||| || || || | || | Sbjct 519323 GCTCAGTGATACAGAAA-AAGACGCTTATATGAAAGTTTTGGGAGGCCTAACCCTTCTGG 519381 Query 90501 ACACGGAGCAGGGGAACACAGGGATTCCTACCATTGCTGAACATATAAACGGACACCAGC 90560 | || ||||| ||| || || ||| || ||| | | |||| |||| Sbjct 519382 ATACCATTCAGGGCGGTGTAGGTATGCCGCAGATTATGGAGCATGTGGATGGACTACAGC 519441 Query 90561 GAAAAGCCGTACTGAACTTCATGGCTATGATGGAAAACTCGGTGCATGCTAAATCGTACA 90620 | || || ||||||| ||| ||||| ||||||||| | | ||||| ||||| |||| Sbjct 519442 GCAAGGCTGTACTGAGCTTTATGGCGATGATGGAACAAA---TTCATGCGAAATCCTACA 519498 Query 90621 GCAACATTTTCCTTACATTAGCACCTACTGAGAAAATTAATGAAGTATTCGAGTGGGTT- 90679 ||| ||||| |||||| || | || ||| ||||| | | ||||| | ||||| Sbjct 519499 GCAGTATTTTTACTACATTGGCCTCAACCGAGGAAATTGACAATGTATTTAAATGGGTGG 519558 Query 90680 AAGAACAACAAATATCTTCAAAAGAAAGCGAAGATCATTGTATCTGT-TTACGAGAGTAT 90738 ||||| | | | ||||| |||| ||||||| | | || || || ||| || || Sbjct 519559 AAGAAAATCCA-TATCTGCAAACCAAAGCGACGGTTATACG-TCAGTATTATATGAACAT 519616 Query 90739 TGAAAAAGGTAATGATGCTTCACTATTTATGGCTCTAGTAGCGTCTGTGTTCCTTGAAAG 90798 ||||| || ||| ||| |||||| | | || || || | | ||||| Sbjct 519617 TGAAACTTCAAAAGATT------TATATATGGCGATGGCCGCTTCCGTACTTTTGGAAAG 519670 Query 90799 TTTCTTGTTCTACAGCGGATTCTACTACCCGTTATACTTCTATGGTCAAGGTAAACTCA- 90857 || ||||| ||||||||||||| |||||| | || || ||| ||||||||||||| Sbjct 519671 TTATTTGTTTTACAGCGGATTCTTCTACCCACTCTATTTAGCTGGACAAGGTAAACTCAC 519730 Query 90858 -TGCAGTCAGGAGAAATTATCAACCTGATTATCCGGGATGAAGCAATTCATGG 90909 |||||| || || || || | |||||| | ||||||||| |||||||| Sbjct 519731 CTGCAGT--GGTGAGATCATTGATCTGATTCTGCGGGATGAAAGTATTCATGG 519781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501123443100160