Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq3227 89.7 2e-12 >seq3227 Length=177096 Score = 89.7 bits (98), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 309661 GCTCCAACCTTCGATGCGACAATCTCCATCAACTTGGCGATAGTCATACGAGAAGGAATG 309720 || || |||||||| | | ||| ||||| | ||||| ||||||||||| |||||| Sbjct 153031 GCGCCGACCTTCGAGAGAAGACACTCGATCAAGTGAGCGATTGTCATACGAGAGGGAATG 153090 Query 309721 GCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCT 309780 || |||||||||||| |||||| ||| | | ||| || |||| ||||| ||| Sbjct 153091 GCGTGAGGGTTGATGATAATGTCCGGTGTGAGGCCGTCCGCTG---TGAATGGCATGTCT 153147 Query 309781 TCTTCAGGTACAATCAAACCAATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCA 309840 |||| | | | ||||| || ||||| || |||| | || |||||||| ||| Sbjct 153148 TCTTGTCGATAGGTGATACCAACGGTACCCTTCTGTCCGTGACGAGATGCAAACTTATCA 153207 Query 309841 CCAAT 309845 ||||| Sbjct 153208 CCAAT 153212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951885940790136