Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq1140 93.3 5e-14
seq1440 91.5 2e-13
>seq1140
Length=804
Score = 93.3 bits (102), Expect = 5e-14
Identities = 163/234 (70%), Gaps = 14/234 (6%)
Strand=Plus/Plus
Query 152505 TCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGAGTCC 152564
||| |||||||| ||| ||||||| | |||| |||| | |||| |||||||| ||
Sbjct 558 TCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCC 616
Query 152565 CTCCTGAGACGCCTTGT----CG-GTATGGCGGAATTGGTAGACGCGCTGGTTTTAGGTA 152619
|| ||| | |||| || || |||||||||||| |||||| || | |||||
Sbjct 617 TTCATGACTCACCTTTATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGAT 676
Query 152620 CCAGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-------T 152672
| || ||||| |||||||| ||||||||||| || || | | || |
Sbjct 677 CTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGACGT 735
Query 152673 AGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 152726
|||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 736 GGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 789
>seq1440
Length=381215
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 152501 TGTCTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGA 152560
|||||||||||||||| |||||||||||| | ||||||| | | ||||||||||||||
Sbjct 328852 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 328793
Query 152561 GTCCCTCCTGAGACG 152575
||||||||| ||||
Sbjct 328792 ATCCCTCCTGGGACG 328778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605640421938920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |