Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq1140 93.3 5e-14 seq1440 91.5 2e-13 >seq1140 Length=804 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/234 (70%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 152505 TCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGAGTCC 152564 ||| |||||||| ||| ||||||| | |||| |||| | |||| |||||||| || Sbjct 558 TCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCC 616 Query 152565 CTCCTGAGACGCCTTGT----CG-GTATGGCGGAATTGGTAGACGCGCTGGTTTTAGGTA 152619 || ||| | |||| || || |||||||||||| |||||| || | ||||| Sbjct 617 TTCATGACTCACCTTTATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGAT 676 Query 152620 CCAGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-------T 152672 | || ||||| |||||||| ||||||||||| || || | | || | Sbjct 677 CTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGACGT 735 Query 152673 AGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 152726 |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 736 GGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 789 >seq1440 Length=381215 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 152501 TGTCTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGA 152560 |||||||||||||||| |||||||||||| | ||||||| | | |||||||||||||| Sbjct 328852 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 328793 Query 152561 GTCCCTCCTGAGACG 152575 ||||||||| |||| Sbjct 328792 ATCCCTCCTGGGACG 328778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605640421938920