Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2971 102 5e-17
seq3060 93.3 3e-14
>seq2971
Length=246349
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||| || ||||| ||||| || |||||||| |||||
Sbjct 200143 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 200084
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || || | || || || |||||||||| |||||||| || | ||
Sbjct 200083 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 200024
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| || | ||| ||| | ||||||||| || || |
Sbjct 200023 GATACCCTCCTTGTCCTGGATCTTCGACTTGA-CATTGTCGATGGTGTCGCTGGACTCGA 199965
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | || || || ||||||||||||
Sbjct 199964 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATA 199915
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | |||||| || |||||| ||| || || ||||||||||| || ||||| || |
Sbjct 200359 ACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCC 200300
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| || | || || ||||| || || | ||||||||| || | || | || || ||
Sbjct 200299 GTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTT 200240
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| || || || | || | ||| | |||||| ||||||||| || | ||||
Sbjct 200239 GTCTTGGATCTT-TGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGA 200181
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || | || || || || || ||||||
Sbjct 200180 TAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCATA 200143
>seq3060
Length=213164
Score = 93.3 bits (102), Expect = 3e-14
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 33551 GAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTC 33610
|| ||| | | || || ||||| || |||||||| ||||| | || ||||| || ||||
Sbjct 59189 GAATGCACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 59248
Query 33611 CGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT-CGGCAATTTTCTGT 33669
| || || |||||||||||||| || | || | || || |||| | | | || || |
Sbjct 59249 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 59308
Query 33670 TTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAA 33728
| |||| ||| | ||||||||| || || || || | |||||| || || || || |
Sbjct 59309 T--GACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAG 59366
Query 33729 CGTTTTTACAAAGATCTGC 33747
|| ||||| ||| | |||
Sbjct 59367 GGTCTTTACGAAGCTGTGC 59385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328689830495040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |