Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3470 183 4e-40 seq963 132 7e-25 seq564 98.7 1e-14 >seq3470 Length=143118 Score = 183 bits (202), Expect = 4e-40 Identities = 359/515 (70%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 117651 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 117593 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 117592 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 117536 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 117535 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 117477 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 117476 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 117417 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 117416 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 117357 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 117356 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 117300 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 117299 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 117245 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| ||| ||||||| ||| ||||||||||| ||||| || | || ||| || ||| Sbjct 117244 GTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 117186 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 117185 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 117151 Score = 93.3 bits (102), Expect = 6e-13 Identities = 180/260 (69%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 1456519 GCAGATCATCGT---CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575 ||||| |||| | |||||||||| ||| ||| | ||||| | | || | || || Sbjct 117048 GCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGACGCTCTTCC 116989 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 ||| | || |||||||| | ||||||| || ||||||||||| |||||| Sbjct 116988 ATGCAAGCTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCC 116931 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 || ||||| || ||| |||||| | ||||| |||| | ||||||| ||| Sbjct 116930 GATCGCCTACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGA 116872 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754 | |||||| || ||||| | |||||||||||||| |||||| || | |||||| Sbjct 116871 CTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGA 116812 Query 1456755 GTACGCCAAGGCCGGCGTCA 1456774 |||| ||||| || |||| Sbjct 116811 GTACCAGAAGGCTGGTGTCA 116792 >seq963 Length=36175 Score = 132 bits (146), Expect = 7e-25 Identities = 325/490 (66%), Gaps = 2/490 (0%) Strand=Plus/Plus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| | || ||||| ||| | |||| | ||| || || || || || | || Sbjct 30376 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 30435 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | ||| |||||| || | ||| || || ||||| || | | ||| Sbjct 30436 CGATGATTTTGTTCGATTGGTTGCAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 30495 Query 332967 CCATGGT-CGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGG 333025 |||| || |||| | || ||||| || || | | || | || || || ||||| | Sbjct 30496 CCATCGTTCGAC-GCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAAA 30554 Query 333026 ATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATG 333085 || | ||||| || |||||| || || ||| ||||| ||| | |||||| Sbjct 30555 ATTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATG 30614 Query 333086 ATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCG 333145 || || |||||||| | ||||||||||| || |||||||||||||| ||||| || Sbjct 30615 CGGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCT 30674 Query 333146 TCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTG 333205 | | ||| | ||| ||||| |||||| ||||| || ||||| ||||| | Sbjct 30675 TTGTAGGCTGGACCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATT 30734 Query 333206 CCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGG 333265 |||||| |||| | | | || ||||||||||| || ||| | |||||| Sbjct 30735 CCGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGG 30794 Query 333266 TAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCG 333325 | | || | ||||||||| ||||||||||| | | |||||||||||||| Sbjct 30795 CGTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCA 30854 Query 333326 ATCCATGGGA 333335 | || |||| Sbjct 30855 ACCCTAGGGA 30864 >seq564 Length=57547 Score = 98.7 bits (108), Expect = 1e-14 Identities = 364/558 (65%), Gaps = 28/558 (5%) Strand=Plus/Plus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 7396 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 7454 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 7455 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 7514 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 7515 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 7573 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTT 263109 || ||||||| || | ||| | || | || ||||||||| | || | Sbjct 7574 GTCGTCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTGTGGTCAGAGAACATG 7633 Query 263110 CGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCG 263169 |||| |||| || | | ||||| | ||| || | | || | || Sbjct 7634 AAGAACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAAC------ATTCCA 7687 Query 263170 CCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACC-GGGTGAC--CATT 263226 ||| |||||||| |||| ||||||||| |||||| | || || | || || | | Sbjct 7688 GACGACCTCAAGGCACTCTACAAGACCGTCTGGGAGAT---CAGCCAGCGTAACATCGTG 7744 Query 263227 GATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTC 263286 | ||||| || ||||| | | | | |||||||| ||| | ||| | || | Sbjct 7745 CAGATGGCTGCTGACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCACATG 7804 Query 263287 GCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGC 263343 || || || || | || || || |||||| | || ||| | ||| Sbjct 7805 AAGGAGCCAACCATGGGCAAG---ATTACCAGCATGCACTTCGCTGGCTGGAAGCTCGGT 7861 Query 263344 CTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGC--CAACGCC-ATTCAATTC 263400 ||||||||||||||||||||||| || || || ||||| || |||| || || ||| Sbjct 7862 CTCAAGACTGGCATGTACTATCTCCGAAC---GCAAGCTGCTTCAGCGCCAATCCAGTTC 7918 Query 263401 ACCGTCGATCAGGCGATG 263418 || ||||| |||| |||| Sbjct 7919 ACTGTCGACCAGGAGATG 7936 Score = 89.7 bits (98), Expect = 7e-12 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153 || |||| || ||| ||| ||| || | |||||||||||| || | ||| | |||||| Sbjct 6830 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 6889 Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212 ||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || | Sbjct 6890 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 6948 Query 262213 GTGCACCGAGATC 262225 |||||| |||||| Sbjct 6949 GTGCACTGAGATC 6961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177470049848994