Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 183 4e-40
seq963 132 7e-25
seq564 98.7 1e-14
>seq3470
Length=143118
Score = 183 bits (202), Expect = 4e-40
Identities = 359/515 (70%), Gaps = 28/515 (5%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || |
Sbjct 117651 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 117593
Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888
| | || | | ||||| ||| || | | ||||||||| || ||||
Sbjct 117592 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 117536
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
|| ||||||||||| || || |||||| ||||||||| || ||||||||| | |
Sbjct 117535 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 117477
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | ||||| || | || |||||||| | || ||||| |||||||||
Sbjct 117476 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 117417
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || || || || || || ||||| || ||| ||| ||
Sbjct 117416 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 117357
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| || || || | |||| || |||||||||| | || | | | |
Sbjct 117356 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 117300
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
||||| ||||||||| || ||||| ||||| | ||||||| || ||| |
Sbjct 117299 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 117245
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240
| ||| ||| ||||||| ||| ||||||||||| ||||| || | || ||| || |||
Sbjct 117244 GTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 117186
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| ||||| ||||| || || |||||| |||| ||
Sbjct 117185 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 117151
Score = 93.3 bits (102), Expect = 6e-13
Identities = 180/260 (69%), Gaps = 7/260 (3%)
Strand=Plus/Minus
Query 1456519 GCAGATCATCGT---CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575
||||| |||| | |||||||||| ||| ||| | ||||| | | || | || ||
Sbjct 117048 GCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGACGCTCTTCC 116989
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
||| | || |||||||| | ||||||| || ||||||||||| ||||||
Sbjct 116988 ATGCAAGCTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCC 116931
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
|| ||||| || ||| |||||| | ||||| |||| | ||||||| |||
Sbjct 116930 GATCGCCTACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGA 116872
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754
| |||||| || ||||| | |||||||||||||| |||||| || | ||||||
Sbjct 116871 CTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGA 116812
Query 1456755 GTACGCCAAGGCCGGCGTCA 1456774
|||| ||||| || ||||
Sbjct 116811 GTACCAGAAGGCTGGTGTCA 116792
>seq963
Length=36175
Score = 132 bits (146), Expect = 7e-25
Identities = 325/490 (66%), Gaps = 2/490 (0%)
Strand=Plus/Plus
Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906
||| ||| | || ||||| ||| | |||| | ||| || || || || || | ||
Sbjct 30376 CGACTTGCCCATCGGTGAGTCGCGCGTAGCGTAAGATTGCGCAGCGCGATTGGAGAGGCT 30435
Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966
|||||| | ||| |||||| || | ||| || || ||||| || | | |||
Sbjct 30436 CGATGATTTTGTTCGATTGGTTGCAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 30495
Query 332967 CCATGGT-CGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGG 333025
|||| || |||| | || ||||| || || | | || | || || || ||||| |
Sbjct 30496 CCATCGTTCGAC-GCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAAA 30554
Query 333026 ATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATG 333085
|| | ||||| || |||||| || || ||| ||||| ||| | ||||||
Sbjct 30555 ATTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATG 30614
Query 333086 ATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCG 333145
|| || |||||||| | ||||||||||| || |||||||||||||| ||||| ||
Sbjct 30615 CGGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCT 30674
Query 333146 TCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTG 333205
| | ||| | ||| ||||| |||||| ||||| || ||||| ||||| |
Sbjct 30675 TTGTAGGCTGGACCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATT 30734
Query 333206 CCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGG 333265
|||||| |||| | | | || ||||||||||| || ||| | ||||||
Sbjct 30735 CCGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGG 30794
Query 333266 TAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCG 333325
| | || | ||||||||| ||||||||||| | | ||||||||||||||
Sbjct 30795 CGTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCA 30854
Query 333326 ATCCATGGGA 333335
| || ||||
Sbjct 30855 ACCCTAGGGA 30864
>seq564
Length=57547
Score = 98.7 bits (108), Expect = 1e-14
Identities = 364/558 (65%), Gaps = 28/558 (5%)
Strand=Plus/Plus
Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930
|| || ||||||||||| |||||| || | | ||| | |||| || |||||||||
Sbjct 7396 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 7454
Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990
|| | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | ||||
Sbjct 7455 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 7514
Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049
||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| ||
Sbjct 7515 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 7573
Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTT 263109
|| ||||||| || | ||| | || | || ||||||||| | || |
Sbjct 7574 GTCGTCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTGTGGTCAGAGAACATG 7633
Query 263110 CGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCG 263169
|||| |||| || | | ||||| | ||| || | | || | ||
Sbjct 7634 AAGAACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAAC------ATTCCA 7687
Query 263170 CCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACC-GGGTGAC--CATT 263226
||| |||||||| |||| ||||||||| |||||| | || || | || || | |
Sbjct 7688 GACGACCTCAAGGCACTCTACAAGACCGTCTGGGAGAT---CAGCCAGCGTAACATCGTG 7744
Query 263227 GATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTC 263286
| ||||| || ||||| | | | | |||||||| ||| | ||| | || |
Sbjct 7745 CAGATGGCTGCTGACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCACATG 7804
Query 263287 GCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGC 263343
|| || || || | || || || |||||| | || ||| | |||
Sbjct 7805 AAGGAGCCAACCATGGGCAAG---ATTACCAGCATGCACTTCGCTGGCTGGAAGCTCGGT 7861
Query 263344 CTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGC--CAACGCC-ATTCAATTC 263400
||||||||||||||||||||||| || || || ||||| || |||| || || |||
Sbjct 7862 CTCAAGACTGGCATGTACTATCTCCGAAC---GCAAGCTGCTTCAGCGCCAATCCAGTTC 7918
Query 263401 ACCGTCGATCAGGCGATG 263418
|| ||||| |||| ||||
Sbjct 7919 ACTGTCGACCAGGAGATG 7936
Score = 89.7 bits (98), Expect = 7e-12
Identities = 101/133 (76%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153
|| |||| || ||| ||| ||| || | |||||||||||| || | ||| | ||||||
Sbjct 6830 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 6889
Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212
||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || |
Sbjct 6890 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 6948
Query 262213 GTGCACCGAGATC 262225
|||||| ||||||
Sbjct 6949 GTGCACTGAGATC 6961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177470049848994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |