Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq1140 111 2e-19
seq2939 107 2e-18
seq3027 98.7 1e-15
seq1440 82.4 9e-11
>seq1140
Length=804
Score = 111 bits (122), Expect = 2e-19
Identities = 170/239 (71%), Gaps = 15/239 (6%)
Strand=Plus/Plus
Query 154256 ATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCG 154315
|||| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| ||||||
Sbjct 553 ATGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCG 611
Query 154316 AGTCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTT 154369
|| || | ||| || || | || || |||||||||||| |||||| | || ||
Sbjct 612 AGCCCTTCATGACTCACCTTTATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTT 671
Query 154370 AGGTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA--- 154426
||| ||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 672 AGGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCG 730
Query 154427 ----TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 154481
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 731 GACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 789
>seq2939
Length=251760
Score = 107 bits (118), Expect = 2e-18
Identities = 168/237 (71%), Gaps = 15/237 (6%)
Strand=Plus/Minus
Query 154258 GACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGAG 154317
|| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| ||||||||
Sbjct 251760 GAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAG 251702
Query 154318 TCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTAG 154371
|| | ||| || ||| || || |||||||||||| |||||| | || ||||
Sbjct 251701 CCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAG 251642
Query 154372 GTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA----- 154426
| ||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 251641 GATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGA 251583
Query 154427 --TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 154481
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 251582 CGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 251526
>seq3027
Length=236980
Score = 98.7 bits (108), Expect = 1e-15
Identities = 172/244 (70%), Gaps = 20/244 (8%)
Strand=Plus/Minus
Query 154257 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 154316
||| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| |||||||
Sbjct 236803 TGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGA 236745
Query 154317 GTCCAACCTGAGTCGCCAGT--------CGGTA-TGGCGGAATTGGTAGACGCGCCAGGT 154367
| || | ||| || ||| | |||| |||||||||||| |||||||| |||
Sbjct 236744 GCCCTTCATGACTCACCATTATATTTTGCGGTCGTGGCGGAATTGGCAGACGCGCACGGT 236685
Query 154368 TTAGGTTCTGGTGTCTTA--TGACGTGGAGGTTCAAGTCCTCT-TACCG-ACACTCGCT- 154422
| |||| | ||| || ||||||||||| |||||||| |||| || | |
Sbjct 236684 TCAGGTCCGTGTGGGCTAACCCCCGTGGAGGTTCGAGTCCTCTCGACCGCACCATATATT 236625
Query 154423 ---CGAA--TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGAT 154477
|| | | |||||| ||||||||| | |||| || || || |||| |||||||||
Sbjct 236624 TTGCGGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGAT 236565
Query 154478 CCCC 154481
|||
Sbjct 236564 TCCC 236561
>seq1440
Length=381215
Score = 82.4 bits (90), Expect = 9e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 154257 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 154316
|| ||||||||||||| |||||||||||| ||||||||||| |||||||| |||||||
Sbjct 321124 TGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTCGA 321183
Query 154317 GTCCAACCTG 154326
||| ||||
Sbjct 321184 ATCCCTCCTG 321193
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 154255 CATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTC 154314
|||| ||||||||||||| ||||||||||||| ||||||||| |||||||| |||||
Sbjct 328854 CATGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTC 328795
Query 154315 GAGTCCAACCTGAGTCGCCA 154334
|| ||| |||| | || ||
Sbjct 328794 GAATCCCTCCTGGGACGTCA 328775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605982806800560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |