Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq1140 100 3e-16 seq2939 98.7 1e-15 >seq1140 Length=804 Score = 100 bits (110), Expect = 3e-16 Identities = 168/240 (70%), Gaps = 16/240 (7%) Strand=Plus/Plus Query 153171 ATGGGTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCG 153230 ||| |||| |||||||| ||| ||||||| | |||| |||| | |||| |||||| Sbjct 553 ATGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCG 611 Query 153231 AGTCCCTCCTGACCCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTT 153284 || || || |||| | || | || || |||||||||||| |||||| | || || Sbjct 612 AGCCCTTCATGACTCACCTTTATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTT 671 Query 153285 AGGTTCTGGTGTCTTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-- 153342 ||| ||| | ||||| |||||||| ||||||||||| || || | | || Sbjct 672 AGGATCTAGCGTCTT--TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGC 729 Query 153343 -----TAGCTCAGAGGTAGAGCAGCACCTTTACACGGTGAATGTCGGGGGTTCGATCCCC 153397 | |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 730 GGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 789 >seq2939 Length=251760 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/236 (70%), Gaps = 16/236 (7%) Strand=Plus/Minus Query 153175 GTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGAGTC 153234 |||| |||||||| ||| ||||||| | |||| |||| | |||| |||||||| | Sbjct 251758 GTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCC 251700 Query 153235 CCTCCTGACCCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTAGGT 153288 | || |||| | ||| || || |||||||||||| |||||| | || ||||| Sbjct 251699 CTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGA 251640 Query 153289 TCTGGTGTCTTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA------ 153342 ||| | ||||| |||||||| ||||||||||| || || | | || Sbjct 251639 TCTAGCGTCTT--TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGAC 251582 Query 153343 -TAGCTCAGAGGTAGAGCAGCACCTTTACACGGTGAATGTCGGGGGTTCGATCCCC 153397 | |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 251581 GTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 251526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610302615802560