Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq1140 100 3e-16
seq2939 98.7 1e-15
>seq1140
Length=804
Score = 100 bits (110), Expect = 3e-16
Identities = 168/240 (70%), Gaps = 16/240 (7%)
Strand=Plus/Plus
Query 153171 ATGGGTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCG 153230
||| |||| |||||||| ||| ||||||| | |||| |||| | |||| ||||||
Sbjct 553 ATGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCG 611
Query 153231 AGTCCCTCCTGACCCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTT 153284
|| || || |||| | || | || || |||||||||||| |||||| | || ||
Sbjct 612 AGCCCTTCATGACTCACCTTTATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTT 671
Query 153285 AGGTTCTGGTGTCTTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-- 153342
||| ||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 672 AGGATCTAGCGTCTT--TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGC 729
Query 153343 -----TAGCTCAGAGGTAGAGCAGCACCTTTACACGGTGAATGTCGGGGGTTCGATCCCC 153397
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 730 GGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 789
>seq2939
Length=251760
Score = 98.7 bits (108), Expect = 1e-15
Identities = 165/236 (70%), Gaps = 16/236 (7%)
Strand=Plus/Minus
Query 153175 GTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGAGTC 153234
|||| |||||||| ||| ||||||| | |||| |||| | |||| |||||||| |
Sbjct 251758 GTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCC 251700
Query 153235 CCTCCTGACCCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTAGGT 153288
| || |||| | ||| || || |||||||||||| |||||| | || |||||
Sbjct 251699 CTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGA 251640
Query 153289 TCTGGTGTCTTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA------ 153342
||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 251639 TCTAGCGTCTT--TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGGAC 251582
Query 153343 -TAGCTCAGAGGTAGAGCAGCACCTTTACACGGTGAATGTCGGGGGTTCGATCCCC 153397
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 251581 GTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 251526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610302615802560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |