Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq2217 105 1e-17
>seq2217
Length=1057156
Score = 105 bits (116), Expect = 1e-17
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 198365 TTCCTCGGCGTGCCGTTCAACATCGCGTCTTACGCATTACTCGTGCACATGGTTGCCCAG 198424
||||| || |||| || ||||| || || ||||| | || ||| ||||||||
Sbjct 566384 TTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGATTGCCCAG 566325
Query 198425 CAG-GTTAACATGGTGCCGGGCGATTTCATTTGGACGGGCGGTGACACACATCTCTACTC 198483
||| || | | || | ||| || ||||| ||| | || || || ||| |||||||
Sbjct 566324 CAGTGTGATCTTGAAGT-GGGAGAGTTCATCTGGTCCGGTGGGGATGTACACATCTACTC 566266
Query 198484 TAATCATCTGGAGCAGGCCAAGCTCCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACT 198543
|| ||| |||| || | || |||| || |||||| || | | || || |||||
Sbjct 566265 AAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCCTAAACT 566206
Query 198544 GATCATCAAGCGTAAACCGGAATCTATCTTCGATTATAAATTCGAAGATTTTGAG 198598
| ||||||||||||| ||||| || || || ||||||| || ||||||||||||
Sbjct 566205 GGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGAG 566151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769159592027960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |