Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq564 284 1e-71 seq3470 111 2e-19 seq3238 93.3 5e-14 seq431 86.0 7e-12 >seq564 Length=57547 Score = 284 bits (314), Expect = 1e-71 Identities = 910/1389 (66%), Gaps = 41/1389 (3%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| ||||| |||| ||||| |||||||||||||| | | | |||||| Sbjct 6173 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 6232 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 6233 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 6291 Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| ||| || | | | | ||| |||||| | | |||| ||||| ||| || Sbjct 6292 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 6348 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | |||||||| | || || | | ||||| ||||| ||| ||||| ||||| Sbjct 6349 TGATGGTATCTACGACACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 6408 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524 ||| | || | || | | || || | | ||| || || | || ||||| || Sbjct 6409 TGGTCTTCATGTTCACAACATCAGGGCTAC--AGGCTCATACATTGGCGGCACAAACGGC 6466 Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584 ||| | ||| || | |||||||| || || | ||| ||| || || || || | Sbjct 6467 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGAC 6526 Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 || | ||| ||||| | || || | || |||| |||||||| |||||||| Sbjct 6527 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCACGCA 6583 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 6584 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 6642 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 6643 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 6702 Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || |||| |||| | || || || || || |||||||| || |||| | ||||| | Sbjct 6703 CACTTGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACG 6761 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| | | || ||| || ||| |||||| || || |||||| | | Sbjct 6762 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 6821 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | ||||||||| || | || |||||||| || ||||| | ||| | Sbjct 6822 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 6881 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| |||||| |||| ||||| || || |||||| | || |||||||| | Sbjct 6882 TGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCT 6941 Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056 | ||| | || || || ||| |||| | | | |||||| ||||| || || | Sbjct 6942 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATC 7001 Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 7002 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 7061 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 |||| ||||| || || ||| ||||| ||||| |||| || || | || | Sbjct 7062 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 7121 Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 7122 ACTACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 7180 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294 || | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 7181 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 7239 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354 ||||| |||| | || ||||||||||| ||||| || ||||||||||| ||| Sbjct 7240 CAAGGAGCTCAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 7296 Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 | ||| | || ||| ||||| || || || | || ||||||| || || Sbjct 7297 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 7356 Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468 || | ||| || | || ||||||| ||| | ||| | || || ||||||| Sbjct 7357 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 7413 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||||| ||| || | ||| | || ||| || ||| | || || || Sbjct 7414 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 7473 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | Sbjct 7474 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 7533 Query 105589 GAACATCTA 105597 ||||| || Sbjct 7534 CAACATTTA 7542 >seq3470 Length=143118 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865 || ||| |||||||||| |||||||| |||||||||||||| | ||| ||| ||||| Sbjct 117245 CGTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 117187 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 117186 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 117127 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| | ||| ||| || || Sbjct 117126 CCGTGATGAGGGCATGCACACAGACTTCGC 117097 >seq3238 Length=176502 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 80888 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 80947 Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286 || |||| | | |||| |||||||| ||||| ||||||| | |||||||| Sbjct 80948 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAGAAACTTCTTGAT 81006 Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345 | || |||| ||| ||| || | ||| || || |||||||| ||||| | Sbjct 81007 GTTC--TGAATCTCGGCGTTCCTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 81064 Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371 ||| |||||||| ||||||||||| Sbjct 81065 ATCTTACCACGAAGTGGGAAGACACC 81090 >seq431 Length=68848 Score = 86.0 bits (94), Expect = 7e-12 Identities = 241/369 (65%), Gaps = 6/369 (2%) Strand=Plus/Minus Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582 ||| ||||| || |||||||| || | || || || || || | || ||||| || Sbjct 47878 ACGGTCAAAACGTCCTGGACGCAGCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGC 47819 Query 9583 GGCGATGACAACAATACCTGTTTCATTATCA---AAACCATCCATCTCTGTCAAAAGTTG 9639 || | || | ||||||| ||||| | ||||||||||| || | | || Sbjct 47818 TGCAACGATGATAATACCT---TCATTGGCTCCGAAACCATCCATTTCAACGAGCAACTG 47762 Query 9640 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC 9699 ||| | |||||||| ||||| || | | | |||||||| || || ||| Sbjct 47761 GTTGAGTGTTTGTTCACGTTCGTCGTGACCACCACCAAGACCAGCACCACGCTGACGTCC 47702 Query 9700 CACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAA 9759 || |||||||| ||||| || |||| ||| ||||| |||| || |||||| Sbjct 47701 TACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAA 47642 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 | || |||||||| || || ||||| |||||||| || || |||| | |||| Sbjct 47641 CAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCGGA 47582 Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 | || ||| || ||| | ||||| |||| || || ||||| | || ||||| Sbjct 47581 AATGCTGAAGAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACC 47522 Query 9880 CGTACCTGG 9888 ||||| || Sbjct 47521 TGTACCCGG 47513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583235012581880