Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq2873 95.1 3e-15 >seq2873 Length=797338 Score = 95.1 bits (104), Expect = 3e-15 Identities = 212/315 (67%), Gaps = 5/315 (2%) Strand=Plus/Plus Query 35881 ATCGGCAGACTGACGAGAGATCCGGAATTAAGATATACTCCATCCGGTGTAGCTGTCACC 35940 |||||| | | || | ||||| || || | ||||||||| | || ||||| || || Sbjct 33778 ATCGGCCGGTTAACCCGGGATCCTGAGTTGCGTTATACTCCAGCTGGAGTAGCAGTTACG 33837 Query 35941 AAGTTTACCCTGGCGGTAGACCGTCCGTATATGAACCAGCAAACGCGTGAGCGAGAGACG 36000 | ||||| |||| || ||| | |||| || | ||| | | | || || || || Sbjct 33838 CAATTTACTTTGGCAGTGGACAGACCGTTTACAAGCCA---AGGGGGAGAACGGGAAGCG 33894 Query 36001 GATTTCATTAATATCGTGACGTGGAGACAAACCGCGGAAGCCTGTGCCAATCACCTTCGC 36060 ||||||||| |||| || |||||||| || || | ||||| || || | ||| Sbjct 33895 GATTTCATTCCGGTCGTAACCTGGAGACAGCTTGCTGAGACTTGTGCAAACTACTTGCGC 33954 Query 36061 AAAGGCCGTTTGACGGCAGTAGAAGGAAGAATCCAGGTGCGTAATTATGAGAACAATGAG 36120 ||||| || | | ||||| |||||| | || || || || ||||| ||||| || || Sbjct 33955 AAAGGACGCCTAGCTGCAGTCGAAGGACGCATTCAAGTACGGAATTACGAGAATAACGAA 34014 Query 36121 GGCCGCAGAATCTATGTAACCGAGGTTGTGGCTGATAATGTGCGCTTTCTT-GAATCAAG 36179 || | | || || ||||| || | || ||||| || || |||||| || ||| Sbjct 34015 GGAAAACGTGTATACGTGACCGAAGTCATTGCCGATAACGTCCG-TTTCTTGGAGTCAGC 34073 Query 36180 TAAAAATGAAAATAA 36194 ||| ||| ||||| Sbjct 34074 TAACCGTGATAATAA 34088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141469257776334