Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_028749.1
Length=134270
Score E
Sequences producing significant alignments: (Bits) Value
seq2217 149 5e-31
>seq2217
Length=1057156
Score = 149 bits (164), Expect = 5e-31
Identities = 251/359 (70%), Gaps = 6/359 (2%)
Strand=Plus/Minus
Query 96678 TAAATTTCTTGTCCAAGCAAACCACCAAATAGTCCATGCACACTTTCATCACGAATGATT 96737
|| ||||| || | | || ||| || ||| ||||| | ||||||||| || | ||
Sbjct 519814 TATATTTCCTGGGCCAACACACCCACATATACACCATGAATACTTTCATCCCGCAGAATC 519755
Query 96738 AAGTTAATAATTTCACCACTTGCAACC-ATCTTCCCTTGACCAGCCAAATACAGAGGGTA 96796
| | ||| || |||||||| ||| | || ||||| ||||| ||||| || |||||
Sbjct 519754 AGATCAATGATCTCACCACT-GCAGGTGAGTTTACCTTGTCCAGCTAAATAGAGTGGGTA 519696
Query 96797 AAAGAAACCACTATAAAATAGGAACGACTCT--AAGAACACAGAGGCTACAATTGCCATA 96854
||||| || || ||||| | || ||| | || | || || || | || ||||||
Sbjct 519695 GAAGAATCCGCTGTAAAACA--AATAACTTTCCAAAAGTACGGAAGCGGCCATCGCCATA 519638
Query 96855 TATAAGTCTTTCTTTGTTTCAATGTTGCGGTAATATTTGTCAATGATAGACACTTTCTTT 96914
||||| ||||| ||||||||||| ||||| | || | | | |||| ||
Sbjct 519637 TATAAATCTTTTGAAGTTTCAATGTTCATATAATACTGACGTATAACCGTCGCTTTGGTT 519578
Query 96915 TGTAGATATTTATTCTCAGCGACCCAATCAAATACATCGTCGATTTCTTCCTTTGTGGCT 96974
|| |||||| ||| || | ||||| | |||||||| ||| ||||| || ||| |||
Sbjct 519577 TGCAGATATGGATTTTCTTCCACCCATTTAAATACATTGTCAATTTCCTCGGTTGAGGCC 519518
Query 96975 AATGTTGTAAAAATTGTACTATAAGATTTTGCATGGATGCCTTCCATCATTCCCATAAA 97033
||||| |||||||| | || || ||||| ||||| || ||||||||| |||||||
Sbjct 519517 AATGTAGTAAAAATACTGCTGTAGGATTTCGCATGAATTTGTTCCATCATCGCCATAAA 519459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429520683773167
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |