Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_029022.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq1109 80.6 8e-11 >seq1109 Length=1760699 Score = 80.6 bits (88), Expect = 8e-11 Identities = 137/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 11256 CCAGTAGCTTCTTTTATAGATGAAATTTCTAAGCATTCTTTCATAGTTGCCACTGGATTA 11315 |||| ||| |||| ||||| |||| || || |||||||||| || || | || | Sbjct 702546 CCAGCAGCCTCTTGAATAGAGGAAAGCTCCAAATATTCTTTCATGGTAGCTGCAGGGCTG 702605 Query 11316 CCTCCAATTGAAAGCTGTCTTTCAGCCAGTTCATCAATATGAAGTGCAGCTTCGTTATAA 11375 || | | ||| | |||||| | ||||| || || | | ||||||| || Sbjct 702606 CCCTTGAGGGTAAGAATACGTTCAGCAATCTCATCCATTTGTACAGTTACTTCGTTGTAG 702665 Query 11376 AGTTCTTCAAATTTTAGATGTAAAGTGAAAAATTGTTGACCTTTAACGAACCAGTGGAAG 11435 | |||||||||||||| ||| | |||||||| | | ||||| || ||||||| || Sbjct 702666 AATTCTTCAAATTTTACATGCAGTGTGAAAAAGTTAGGTCCTTTTACATACCAGTGATAG 702725 Query 11436 TTATGAAGTTTAATGTACA 11454 ||||||| ||| | |||| Sbjct 702726 TTATGAATTTTGACATACA 702744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149936102138058