Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq3049 196 4e-45 >seq3049 Length=215958 Score = 196 bits (216), Expect = 4e-45 Identities = 476/721 (66%), Gaps = 0/721 (0%) Strand=Plus/Minus Query 48768 CATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTC 48827 |||||| | |||||| || || ||||| || | ||| || || || ||||| | Sbjct 93716 CATATCGGAAATGACAGCCATCGTTTTGCGGCCAACATTGTTACCGATGCTTACCATGGC 93657 Query 48828 TTGTGCTAATGCTTTAGAGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAAC 48887 ||||| | | |||| | ||||| || ||||| ||||| || |||||||| || Sbjct 93656 ATGTGCCAGTTCTTTTGCATCTTCCGTAGTCTTCATGAATGCACCCGCACCTGTTTTGAC 93597 Query 48888 ATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAAT 48947 ||| | ||| || ||||| || || ||| ||||| |||||||| ||| || || || Sbjct 93596 ATCCAGTACGATGGCATCGGCACCTGCTGCAATTTTCTTACTCATGATGGAGCTGGCGAT 93537 Query 48948 TAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGC 49007 | ||| || || || || || | ||||| || || |||||||| | |||||||| || Sbjct 93536 CAGTGGGATGGAGTTCACGGTAGCTGTAACGTCACGCAATGCATAGAGCTTTTTGTCTGC 93477 Query 49008 AGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTAACTTGATTAAT 49067 || | | ||||||||||| | | || | ||||||| ||||| | || Sbjct 93476 TGGTGTGAGGTTGCCACTTTGTCCGATAACCGCCACTTTATGTTCGTTAACGAGTCGGAT 93417 Query 49068 AAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGT 49127 || | |||| | | ||||| | |||||| | ||||| | |||||| |||| Sbjct 93416 GAACTCTTCTTTCTCCAGCTCTACATGGAAGCCTGCAACGGATTCCAGTTTGTCTGTTGT 93357 Query 49128 TCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGC 49187 || || ||||| || || || | || |||||||| |||||||||| | | | || || Sbjct 93356 ACCACCAGTGTGACCCAATCCACGTCCGGACATTTTGGCAACAGGAACATCGAGAGCTGC 93297 Query 49188 AACCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTGGAATGTTTATC 49247 ||| | ||| || | | | | | ||||||| || || || ||||| || || || Sbjct 93296 AACGAGTGGTGCCAGTACCAGCGTTGTGGTATCGCCTACGCCTCCCGTGGAGTGCTTGTC 93237 Query 49248 TACTTTTACACCTTCGATTTTTGATAGGTCAATTGTTTCACCAGAATTAATCATGGCATT 49307 |||||| | |||||| ||| || || ||||| || || || || || | ||| | | Sbjct 93236 TACTTTGATACCTTCAATTGCGGACAGATCAATCGTCTCGCCCGAGTTCACCATAGACAT 93177 Query 49308 AGTTAAGGCAGAGATTTCTTCTTTAGACATGCCATTGAAATAAATTGCCATTAACATAGA 49367 || || | | | ||| | | | ||| | ||||| | || ||||| | || Sbjct 93176 GGTCAAATCTGCGCGTTCCTTGTCCGTCATATCCTTGAAGAATATGGCCATCGCCCAAGC 93117 Query 49368 AGCCATTTGATAATCAGGAATGTCGCCGTTCGTGTAACCGCGGATGATAAAATCAATTTC 49427 | ||| ||||| || || || || | ||| || || | | | ||||||||| || Sbjct 93116 GCTGACTTGGTAATCCGGGATTTCCCCTTGCGTATATCCTTGAACAACAAAATCAATCTC 93057 Query 49428 TTCTTTTGAAAGCTCATAACCATCCCGTTTTTTCGCAATTAAATCGACCATTCTCATGAT 49487 | ||| || || | || || || || || ||||| | || |||||||||||||| Sbjct 93056 AGCAGTTGTCAGTTCTTTTCCGTCGCGCTTCTTAGCAATAATGTCTACCATTCTCATGAT 92997 Query 49488 G 49488 | Sbjct 92996 G 92996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452005614818160