Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_029073.1
Length=141298
Score E
Sequences producing significant alignments: (Bits) Value
seq3049 196 4e-45
>seq3049
Length=215958
Score = 196 bits (216), Expect = 4e-45
Identities = 476/721 (66%), Gaps = 0/721 (0%)
Strand=Plus/Minus
Query 48768 CATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTC 48827
|||||| | |||||| || || ||||| || | ||| || || || ||||| |
Sbjct 93716 CATATCGGAAATGACAGCCATCGTTTTGCGGCCAACATTGTTACCGATGCTTACCATGGC 93657
Query 48828 TTGTGCTAATGCTTTAGAGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAAC 48887
||||| | | |||| | ||||| || ||||| ||||| || |||||||| ||
Sbjct 93656 ATGTGCCAGTTCTTTTGCATCTTCCGTAGTCTTCATGAATGCACCCGCACCTGTTTTGAC 93597
Query 48888 ATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAAT 48947
||| | ||| || ||||| || || ||| ||||| |||||||| ||| || || ||
Sbjct 93596 ATCCAGTACGATGGCATCGGCACCTGCTGCAATTTTCTTACTCATGATGGAGCTGGCGAT 93537
Query 48948 TAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGC 49007
| ||| || || || || || | ||||| || || |||||||| | |||||||| ||
Sbjct 93536 CAGTGGGATGGAGTTCACGGTAGCTGTAACGTCACGCAATGCATAGAGCTTTTTGTCTGC 93477
Query 49008 AGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTAACTTGATTAAT 49067
|| | | ||||||||||| | | || | ||||||| ||||| | ||
Sbjct 93476 TGGTGTGAGGTTGCCACTTTGTCCGATAACCGCCACTTTATGTTCGTTAACGAGTCGGAT 93417
Query 49068 AAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGT 49127
|| | |||| | | ||||| | |||||| | ||||| | |||||| ||||
Sbjct 93416 GAACTCTTCTTTCTCCAGCTCTACATGGAAGCCTGCAACGGATTCCAGTTTGTCTGTTGT 93357
Query 49128 TCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGC 49187
|| || ||||| || || || | || |||||||| |||||||||| | | | || ||
Sbjct 93356 ACCACCAGTGTGACCCAATCCACGTCCGGACATTTTGGCAACAGGAACATCGAGAGCTGC 93297
Query 49188 AACCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTGGAATGTTTATC 49247
||| | ||| || | | | | | ||||||| || || || ||||| || || ||
Sbjct 93296 AACGAGTGGTGCCAGTACCAGCGTTGTGGTATCGCCTACGCCTCCCGTGGAGTGCTTGTC 93237
Query 49248 TACTTTTACACCTTCGATTTTTGATAGGTCAATTGTTTCACCAGAATTAATCATGGCATT 49307
|||||| | |||||| ||| || || ||||| || || || || || | ||| | |
Sbjct 93236 TACTTTGATACCTTCAATTGCGGACAGATCAATCGTCTCGCCCGAGTTCACCATAGACAT 93177
Query 49308 AGTTAAGGCAGAGATTTCTTCTTTAGACATGCCATTGAAATAAATTGCCATTAACATAGA 49367
|| || | | | ||| | | | ||| | ||||| | || ||||| | ||
Sbjct 93176 GGTCAAATCTGCGCGTTCCTTGTCCGTCATATCCTTGAAGAATATGGCCATCGCCCAAGC 93117
Query 49368 AGCCATTTGATAATCAGGAATGTCGCCGTTCGTGTAACCGCGGATGATAAAATCAATTTC 49427
| ||| ||||| || || || || | ||| || || | | | ||||||||| ||
Sbjct 93116 GCTGACTTGGTAATCCGGGATTTCCCCTTGCGTATATCCTTGAACAACAAAATCAATCTC 93057
Query 49428 TTCTTTTGAAAGCTCATAACCATCCCGTTTTTTCGCAATTAAATCGACCATTCTCATGAT 49487
| ||| || || | || || || || || ||||| | || ||||||||||||||
Sbjct 93056 AGCAGTTGTCAGTTCTTTTCCGTCGCGCTTCTTAGCAATAATGTCTACCATTCTCATGAT 92997
Query 49488 G 49488
|
Sbjct 92996 G 92996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452005614818160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |