Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2971 167 5e-36
seq3060 132 1e-25
seq3038 93.3 1e-13
>seq2971
Length=246349
Score = 167 bits (184), Expect = 5e-36
Identities = 172/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | || || | ||| ||||||||||| || |||||||| ||||||| |||
Sbjct 200368 TCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAG 200309
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|||| || || || ||||||||||| |||||||| || || || ||||| || || |
Sbjct 200308 TGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGAT 200249
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| |||||||| ||||||||| || ||||| ||||| ||||| || ||| || ||
Sbjct 200248 GCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTC 200189
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| ||||| || ||||| ||||| || || | |||||
Sbjct 200188 GAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144
Score = 158 bits (174), Expect = 3e-33
Identities = 155/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || |||||| ||| || |||||||| || || | |||||
Sbjct 199909 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 199850
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||||||||| || | |||||| |||||||| |||| ||
Sbjct 199849 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 199790
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| ||||||||||| ||||| || ||||||||||| || |||||||||||
Sbjct 199789 TTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAG 199730
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
|| || ||||| || ||||
Sbjct 199729 GGTAATGGTCTTGCCGGTGA 199710
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||| || ||||| |||||||| || || | || || | |||||
Sbjct 200127 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 200068
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||||||||| || || ||||| || |||||||| || | || |||||||||
Sbjct 200067 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 200008
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| | || |||||||| ||||| |||
Sbjct 200007 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 199948
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | ||||||
Sbjct 199947 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 199916
>seq3060
Length=213164
Score = 132 bits (146), Expect = 1e-25
Identities = 146/193 (76%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 210916 GAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGC 210975
|| || || | || ||||||||||| || | ||||| | ||||| |||| |||||| |
Sbjct 59189 GAATGCACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 59248
Query 210976 CTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTT 211035
| |||||||| | || || ||||| || || | ||| ||||||||||||||||| |
Sbjct 59249 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 59308
Query 211036 TCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGA 211092
| || || ||||||||||| ||| || |||||||| ||||| ||||| || ||||
Sbjct 59309 TGACATTGTCGATGGTGTC---GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGA 59365
Query 211093 GAGTCTTTACAAA 211105
| |||||||| ||
Sbjct 59366 GGGTCTTTACGAA 59378
>seq3038
Length=227906
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||| ||| || || ||||| || || | ||||| | |||||
Sbjct 26313 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 26372
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| | ||| || ||||| || |||| ||| ||||||||
Sbjct 26373 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 26431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159099469767005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |