Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2971 134 3e-26
seq3060 93.3 1e-13
>seq2971
Length=246349
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||||||||| |||||||| |||| ||||| |||| || ||| | |||||
Sbjct 200127 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 200068
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || || || || || || ||||| || || ||||| ||||||||
Sbjct 200067 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 200008
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || || || || | ||||| |||
Sbjct 200007 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 199948
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | ||| | |||||
Sbjct 199947 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 199916
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | ||| |||||||| || || |||| |||||||| | | ||
Sbjct 200365 ACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGT 200306
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 200305 CCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCC 200246
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||||||| ||| || ||||| ||||| || | |||||| || |
Sbjct 200245 CTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAG 200186
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | ||||||
Sbjct 200185 TGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144
Score = 123 bits (136), Expect = 6e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| || ||||||||| || || |||| ||||| |||| || ||
Sbjct 199909 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 199850
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || ||||| || | ||||| ||||| || ||||| ||
Sbjct 199849 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 199790
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||||||| ||||||||||| || | || || || |
Sbjct 199789 TTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAG 199730
Query 225672 CGTGATCGTCTTGCCCGT 225689
|| || |||||||| ||
Sbjct 199729 GGTAATGGTCTTGCCGGT 199712
>seq3060
Length=213164
Score = 93.3 bits (102), Expect = 1e-13
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || | |||||| ||||||||||| | || || ||||| || || || || |||
Sbjct 59230 CCATCCTCCAACTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCC 59289
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| ||| ||||||||||| | || || || | ||||
Sbjct 59290 TTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTG 59349
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| |||||||| || | || |||| |||
Sbjct 59350 ATGGTCTTGCCAGTGAGGGTCTTTACGAA 59378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192477157094678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |