Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_030920.1
Length=165868
Score E
Sequences producing significant alignments: (Bits) Value
seq3027 172 6e-38
seq2217 111 2e-19
>seq3027
Length=236980
Score = 172 bits (190), Expect = 6e-38
Identities = 575/881 (65%), Gaps = 33/881 (4%)
Strand=Plus/Plus
Query 97777 ACAGTACCGGCTATCGAAATCTTTAAACGTATCATGATCTCTCAACTAGAGACAGGCACA 97836
|| || | ||| || || ||| | |||||| |||||| || ||||| || ||||| ||
Sbjct 12214 ACGGTTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACG 12273
Query 97837 CCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAACCAAAACAA-GCACGCGGGTAT 97895
||||||||||||||||| ||||| || |||||| | || | ||||| |||| | || ||
Sbjct 12274 CCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACAC-GGCAT 12332
Query 97896 GATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAACCAAGGAACAACAGTCGTAAC 97955
| | |||| ||| ||||||||| ||||||| || |||||| |||| || ||
Sbjct 12333 GGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAACCAATCTGCAACGGTAGTTGA 12392
Query 97956 AGAGGAA------ATAACAGAAGACGGTAA------GATCGTTATTACAAAAAGCCCTGG 98003
| ||||| |||| |||| || | ||||| ||| | ||| || ||
Sbjct 12393 AAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 12452
Query 98004 TGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAGCTCGCGCTGTAACAGACGAAG 98062
|| || |||||||| || || | | || ||| |||| || || || || | | || |
Sbjct 12453 CGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGGCACGTGCCGTGCCTCATGATG 12511
Query 98063 TACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAGACAACGTAATTGAGCTGAATG 98122
|| | ||||| || | || ||||| |||||||| ||||||||||||| || | ||
Sbjct 12512 TATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAGACAACGTAATCGACATCAACA 12571
Query 98123 ATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAATATCGTGCAGTCGGCTTAGGTA 98182
| || || || ||||| | | | ||| |||| ||||| || || | || |
Sbjct 12572 ACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAATACCGTGCGGTTGGTCTGGGAA 12631
Query 98183 CATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTGCATGGGAAACAGACGAAGCAG 98242
|||||||| | ||| | || ||||| || ||| |||||| | || |||||||
Sbjct 12632 CATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTCGTTGGGAATCGGAAGAAGCAG 12691
Query 98243 TAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACTTAACAGTTCAAGCTTCTATGG 98302
| ||| |||| || || ||| | ||| || | || |||| ||||
Sbjct 12692 TCACATATAACGATAATCTGTATGAAAAAATTAACTATCTGCTCGTGAAAGCCAGCATGG 12751
Query 98303 AGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTGGGTCAGAATTCGATACAGGCG 98362
| || || || || ||||| |||||| ||||| || || || | | ||||||
Sbjct 12752 AACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAGGTTCCGATTGGCAAACAGGCA 12811
Query 98363 AGTACTTCTTCAAGCGAGGATATA--TC----GAACGTGGAG--GAAGTAACGTAAAAGA 98414
| |||||| | | || | || | || || || | || ||| | ||| | |
Sbjct 12812 AATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCGTAGGCGAATT--CGTTACAAC 12869
Query 98415 AGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATGACAATGGTGTACGTAACGGTT 98473
| || | ||||| || | || | | | || || | || ||||||||||||| |
Sbjct 12870 TGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGCAAAACGGTGTACGTAACGCCT 12925
Query 98474 ACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCATTGCAGGATCAACAGCAAGTA 98533
|| | || | ||||| || || | || || |||||||| || |||||||| || |
Sbjct 12926 GGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCATTGCCGGTTCAACAGCCAGCA 12985
Query 98534 TCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAAAAGAACTACAAGATTCCGGTA 98592
| || || | || || | ||| | | |||||||||| || ||||||||| |
Sbjct 12986 TTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAAACGACTTACAAGATTGCCAAC 13044
Query 98593 ACTGCACCAGACTTATCGCCAGCTACAACATGGTACTACAA 98633
| ||||| ||| |||| | || | |||||||||||
Sbjct 13045 CCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTACAA 13085
>seq2217
Length=1057156
Score = 111 bits (122), Expect = 2e-19
Identities = 166/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 132752 AATATGAGATTAGTGTGGAACGTAGTACATCGGTTTATCAATAGGGGTTATCTTCCCGAA 132811
|| || ||| | || ||| ||| ||||| || ||||| || ||||| ||| || |||
Sbjct 900304 AACATCAGACTCGTCTGGTCCGTCGTACAACGTTTTATGAACAGGGGATATGAGCCGGAA 900245
Query 132812 GACCTATTCCAAATTGGTTGTATAGGTTTGCTGAAGAGTATTGATAAATTCGACCTTGAC 132871
|| || || || ||||||||||| || |||| || | ||||||||||| ||
Sbjct 900244 GATCTGTTTCAGATTGGTTGTATCGGGCTGCTCAAATCGGTGGATAAATTCGATCTCAGT 900185
Query 132872 TACGATGTTGCTTTTTCTACCTACGCTGTTCCTATGATTATTGGAGAGATTCAAAGGTTT 132931
|| ||||| || || ||||| ||||| || |||||||| ||||| ||||| | ||
Sbjct 900184 TATGATGTGAAATTCTCCACCTATGCTGTCCCGATGATTATCGGAGAAATTCAGCGTTTC 900125
Query 132932 ATTAGGGATGATGGAACCGTAAAGGTACCTCGAACAATTAAGGAGTTAGCAAATAA 132987
| |||||||||| || | ||||| ||| || | ||||| | || |||||
Sbjct 900124 CTGCGGGATGATGGTACACTCAAGGTCAGTCGTTCACTCAAGGAAATGGCGAATAA 900069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530626138654560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |