Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_030920.1 Length=165868 Score E Sequences producing significant alignments: (Bits) Value seq3027 172 6e-38 seq2217 111 2e-19 >seq3027 Length=236980 Score = 172 bits (190), Expect = 6e-38 Identities = 575/881 (65%), Gaps = 33/881 (4%) Strand=Plus/Plus Query 97777 ACAGTACCGGCTATCGAAATCTTTAAACGTATCATGATCTCTCAACTAGAGACAGGCACA 97836 || || | ||| || || ||| | |||||| |||||| || ||||| || ||||| || Sbjct 12214 ACGGTTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACG 12273 Query 97837 CCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAACCAAAACAA-GCACGCGGGTAT 97895 ||||||||||||||||| ||||| || |||||| | || | ||||| |||| | || || Sbjct 12274 CCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACAC-GGCAT 12332 Query 97896 GATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAACCAAGGAACAACAGTCGTAAC 97955 | | |||| ||| ||||||||| ||||||| || |||||| |||| || || Sbjct 12333 GGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAACCAATCTGCAACGGTAGTTGA 12392 Query 97956 AGAGGAA------ATAACAGAAGACGGTAA------GATCGTTATTACAAAAAGCCCTGG 98003 | ||||| |||| |||| || | ||||| ||| | ||| || || Sbjct 12393 AAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 12452 Query 98004 TGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAGCTCGCGCTGTAACAGACGAAG 98062 || || |||||||| || || | | || ||| |||| || || || || | | || | Sbjct 12453 CGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGGCACGTGCCGTGCCTCATGATG 12511 Query 98063 TACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAGACAACGTAATTGAGCTGAATG 98122 || | ||||| || | || ||||| |||||||| ||||||||||||| || | || Sbjct 12512 TATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAGACAACGTAATCGACATCAACA 12571 Query 98123 ATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAATATCGTGCAGTCGGCTTAGGTA 98182 | || || || ||||| | | | ||| |||| ||||| || || | || | Sbjct 12572 ACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAATACCGTGCGGTTGGTCTGGGAA 12631 Query 98183 CATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTGCATGGGAAACAGACGAAGCAG 98242 |||||||| | ||| | || ||||| || ||| |||||| | || ||||||| Sbjct 12632 CATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTCGTTGGGAATCGGAAGAAGCAG 12691 Query 98243 TAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACTTAACAGTTCAAGCTTCTATGG 98302 | ||| |||| || || ||| | ||| || | || |||| |||| Sbjct 12692 TCACATATAACGATAATCTGTATGAAAAAATTAACTATCTGCTCGTGAAAGCCAGCATGG 12751 Query 98303 AGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTGGGTCAGAATTCGATACAGGCG 98362 | || || || || ||||| |||||| ||||| || || || | | |||||| Sbjct 12752 AACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAGGTTCCGATTGGCAAACAGGCA 12811 Query 98363 AGTACTTCTTCAAGCGAGGATATA--TC----GAACGTGGAG--GAAGTAACGTAAAAGA 98414 | |||||| | | || | || | || || || | || ||| | ||| | | Sbjct 12812 AATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCGTAGGCGAATT--CGTTACAAC 12869 Query 98415 AGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATGACAATGGTGTACGTAACGGTT 98473 | || | ||||| || | || | | | || || | || ||||||||||||| | Sbjct 12870 TGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGCAAAACGGTGTACGTAACGCCT 12925 Query 98474 ACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCATTGCAGGATCAACAGCAAGTA 98533 || | || | ||||| || || | || || |||||||| || |||||||| || | Sbjct 12926 GGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCATTGCCGGTTCAACAGCCAGCA 12985 Query 98534 TCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAAAAGAACTACAAGATTCCGGTA 98592 | || || | || || | ||| | | |||||||||| || ||||||||| | Sbjct 12986 TTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAAACGACTTACAAGATTGCCAAC 13044 Query 98593 ACTGCACCAGACTTATCGCCAGCTACAACATGGTACTACAA 98633 | ||||| ||| |||| | || | ||||||||||| Sbjct 13045 CCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTACAA 13085 >seq2217 Length=1057156 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 132752 AATATGAGATTAGTGTGGAACGTAGTACATCGGTTTATCAATAGGGGTTATCTTCCCGAA 132811 || || ||| | || ||| ||| ||||| || ||||| || ||||| ||| || ||| Sbjct 900304 AACATCAGACTCGTCTGGTCCGTCGTACAACGTTTTATGAACAGGGGATATGAGCCGGAA 900245 Query 132812 GACCTATTCCAAATTGGTTGTATAGGTTTGCTGAAGAGTATTGATAAATTCGACCTTGAC 132871 || || || || ||||||||||| || |||| || | ||||||||||| || Sbjct 900244 GATCTGTTTCAGATTGGTTGTATCGGGCTGCTCAAATCGGTGGATAAATTCGATCTCAGT 900185 Query 132872 TACGATGTTGCTTTTTCTACCTACGCTGTTCCTATGATTATTGGAGAGATTCAAAGGTTT 132931 || ||||| || || ||||| ||||| || |||||||| ||||| ||||| | || Sbjct 900184 TATGATGTGAAATTCTCCACCTATGCTGTCCCGATGATTATCGGAGAAATTCAGCGTTTC 900125 Query 132932 ATTAGGGATGATGGAACCGTAAAGGTACCTCGAACAATTAAGGAGTTAGCAAATAA 132987 | |||||||||| || | ||||| ||| || | ||||| | || ||||| Sbjct 900124 CTGCGGGATGATGGTACACTCAAGGTCAGTCGTTCACTCAAGGAAATGGCGAATAA 900069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530626138654560