Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 143 4e-29
seq564 125 1e-23
>seq3470
Length=143118
Score = 143 bits (158), Expect = 4e-29
Identities = 548/851 (64%), Gaps = 12/851 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| ||||| || || ||||| |||||||| || || || ||||| ||| || || ||
Sbjct 116803 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 116862
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || || | || || | || || || | | | | |
Sbjct 116863 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT 116922
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| || |||||||| || || | ||| | || ||||| || | ||
Sbjct 116923 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 116982
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
||| || ||||| || || | ||||| || ||||| ||||| || || | || ||
Sbjct 116983 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATGAT- 117041
Query 46579 GATGTT-ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | | || ||| | || | | ||| ||| |||| | || || ||
Sbjct 117042 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 117101
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||| ||||| | || | ||||| || ||||||||||| | |||
Sbjct 117102 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 117161
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| ||||| || || ||||| || ||||| || ||||||||||| ||||| ||||| ||
Sbjct 117162 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTC 117221
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814
|| || || ||||||| || | || | | | | || | | ||||| |
Sbjct 117222 AACGGCGGCAAATGCGATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 117281
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||| | | || || || | || || ||||| || || |
Sbjct 117282 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 117341
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
|| | | || | | |||||||| || | ||| ||| | || || ||
Sbjct 117342 TGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTG 117401
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
||||| || || ||||| || ||||| || |||| ||| || | ||||| |||||
Sbjct 117402 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC 117461
Query 46995 TGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053
| | || || || ||| | ||||| || || || ||||| || || || ||||
Sbjct 117462 AGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 117520
Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTCCAGTCATTG 47109
| | || ||| || || || ||| ||| || |||| | || |||||||| | |
Sbjct 117521 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC-GCTTGTTCCAGTCGTGG 117579
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | || ||||||||||||||||| ||||| || ||||| |||
Sbjct 117580 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 117639
Query 47170 ATATTCCATAT 47180
|| | ||||||
Sbjct 117640 ATTTGCCATAT 117650
>seq564
Length=57547
Score = 125 bits (138), Expect = 1e-23
Identities = 615/977 (63%), Gaps = 30/977 (3%)
Strand=Plus/Minus
Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATC 76330
||||| | || || ||||| || || || ||||||| | | | || | || |||
Sbjct 7017 AGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATC 6958
Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390
|| ||||| | |||| | |||||| || |||||||| | ||||||||||| |||
Sbjct 6957 TCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTG 6898
Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGAT 76450
| |||||| || |||| || || || || || || |||| | |||| |||||
Sbjct 6897 GCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCA 6838
Query 76451 TTCCAGACGACTCTAGCTTTTATTATA--GATTTGTATCGCTTC--------TCTCTTTC 76500
| ||| | |||| | | || || || | | ||||| ||
Sbjct 6837 TACCATA----------TTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTC 6788
Query 76501 ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTC 76560
||| | || | | | || || || || | ||||| || |||||| |||||
Sbjct 6787 ATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTC 6728
Query 76561 ATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGG 76620
|| || ||||| | | ||| || | | | || || | |||||||||||| ||
Sbjct 6727 GTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 6668
Query 76621 TATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTT 76680
||||| ||||| || | ||| || | | | |||||| ||||| |||||
Sbjct 6667 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 6608
Query 76681 AAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACC 76740
||| || | ||||| ||| | || | ||||| || || || || || || | | ||||
Sbjct 6607 AAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACC 6548
Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800
|| || || || || ||||| || | || | |||||||| || || |||| | |||
Sbjct 6547 TGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCAT 6488
Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860
||| | || ||||| ||||| || ||||| || ||| || || || | ||
Sbjct 6487 TGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGAT 6428
Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920
|| || | || || || || || || | || ||||| | ||||| || |
Sbjct 6427 GTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 6368
Query 76921 TGTGTCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGAAGAAAACAGCTAG 76976
||||| ||||| || || || || |||||| ||||| |||||| | |||||
Sbjct 6367 GGTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 6308
Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036
|| || || || ||| | || | ||| || || ||||| ||||| | |
Sbjct 6307 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 6252
Query 77037 TTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095
| || | |||| |||||||| || || ||||||| || || ||||| ||
Sbjct 6251 TCAACGACATGTAG-TTGTATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCG 6193
Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAAC 77155
||||| |||||||| | ||| || || |||| || || ||| || ||| | |
Sbjct 6192 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGA 6133
Query 77156 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAA 77215
| ||||||| |||| ||| || || || || || | ||| ||||| | || ||
Sbjct 6132 AGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAG 6073
Query 77216 ATAATAACCGAATTTAG 77232
| ||| |||| || ||
Sbjct 6072 ACAATGGCCGAGTTCAG 6056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712902879387840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |