Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq2217 104 4e-17
>seq2217
Length=1057156
Score = 104 bits (114), Expect = 4e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130
||||| ||||| ||||| ||| ||| |||| || ||| | || | |||||| |
Sbjct 566837 GACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATCC 566778
Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190
||||||||||||| || || ||||| | || ||| ||| |||| || || ||
Sbjct 566777 GAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTTG 566718
Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250
|| ||||| ||| ||| || || || || |||||||| || || ||| | |||
Sbjct 566717 TTATGGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGATC 566658
Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGG 196297
|||||||| ||||| || ||| |||| ||| | || || || |||||
Sbjct 566657 TGGGATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGG 566611
Score = 89.7 bits (98), Expect = 8e-13
Identities = 162/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 196785 TTCCTCGGTGTCCCGTTCAACATCGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAG 196844
||||| || | || || ||||| || || || ||||| || ||| | || |||
Sbjct 566384 TTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGATTGCCCAG 566325
Query 196845 CAGGTCAATATGGTGGCGGGTGATTTCGTCTGGACGGGCGGCGAT--ACCCATCTGTACT 196902
||| || | | | ||| || ||| ||||| | || || ||| || ||||| |||
Sbjct 566324 CAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACACATCT--ACT 566267
Query 196903 CTAACCATCTGGAACAGGCCACGTTGCAGCTCTCCCGTGTACCGCATGATCTGCCTAAGC 196962
| |||||| ||||||| | | ||| | |||| ||| | | ||||||| |
Sbjct 566266 CAAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCCTAAAC 566207
Query 196963 TCGTTATCAAACGTAAACCGGATTCCATTTTCGACTATAAGTTCGAAGATTTTGA 197017
| || ||||| ||||| |||||||||||||| || |||| ||| |||||||||||
Sbjct 566206 TGGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGA 566152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770273142792920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |