Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq2217 138 4e-28 >seq2217 Length=1057156 Score = 138 bits (152), Expect = 4e-28 Identities = 413/626 (66%), Gaps = 26/626 (4%) Strand=Plus/Minus Query 51724 TGCATAATGGTGTCGAGAAGGGGGATCGGACGGGTGTAGGTACTCGATCGGTTTTCGGCG 51783 || |||| || || | ||||| || || || || || || | ||| ||||| ||| Sbjct 566860 TGGATAACGGCGTGCATAAGGGAGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCA 566801 Query 51784 CTCAACTTAGGTATGACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATT 51843 || || | |||||||| | || |||||||| | || |||||| | ||| Sbjct 566800 GACAGCTCCGATATGACCTATCCGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATC 566741 Query 51844 TCCCATCAGTGGTCGGGGAGTTGCTGTGGTTGCTTT---CGGGCTCTACGAACGTCAACG 51900 | |||||| | |||||| | ||||| ||| |||| |||||| | | Sbjct 566740 TGAAATCAGTCATTCATGAGTTGTTATGGTT--TTTGAGCGGGGA-TACGAATATATCCT 566684 Query 51901 ATCTCCATAAGTACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGG 51960 |||| | | | ||||| | || ||||| || ||||| || ||||||||| | ||| Sbjct 566683 ATCTGAAGGAAAATGGCGTGAAGATCTGGGATGATTGGGCTGACGAAAATGGTGATTTGG 566624 Query 51961 GTCCTGTGTATGGTAAGCAGTGGCGTAGTTGGGATGCTGG---TGGCGGCAAGGTCATCG 52017 |||| || || || || ||||| | |||||| || ||| | ||| || | Sbjct 566623 GTCCGGTATACGGATCTCAATGGCGCACTTGGGAAGCACCCAATGGAGAGAAG---ATTG 566567 Query 52018 ATCAGATCCATGAAGTCGTCA---AATCAATTAAGAACGATCCTGATAGTCGACGGCACA 52074 ||||||| || || || | | |||||||| ||| |||| ||| ||||| ||| Sbjct 566566 ATCAGAT---TGCAGCTGTAATTGATTCAATTAAAAACAATCCGGATTCACGACGTCACC 566510 Query 52075 TTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACAC 52134 | || || |||||||||| || | | | ||| || | || |||||| Sbjct 566509 TCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACATGAAACTGCCCCCTTGCCATTTCG 566450 Query 52135 TATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTG-TATCA--GCGGTCTG 52191 || || || || || ||||| ||||| || || || | || | || ||| || | Sbjct 566449 CGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCATG---TATGCTCACAATGCGTTCCG 566393 Query 52192 CCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGA 52251 || | |||| |||| | || |||||||||||||||||| | ||| |||| ||| ||| Sbjct 566392 TGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGA 566333 Query 52252 TTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCAT 52310 |||| | |||||| || ||||| || || || ||||| ||| | ||||| || || || Sbjct 566332 TTGC-CCAGCAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACAC 566274 Query 52311 ATCTACAACAACCATGTAGATCAGGT 52336 |||||| |||||||| || || || Sbjct 566273 ATCTACTCAAACCATGTGGAACAAGT 566248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190088015611570