Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_031245.1
Length=221908
Score E
Sequences producing significant alignments: (Bits) Value
seq3027 114 2e-20
>seq3027
Length=236980
Score = 114 bits (126), Expect = 2e-20
Identities = 191/271 (70%), Gaps = 9/271 (3%)
Strand=Plus/Plus
Query 21324 TTCAG-CTATCGATATATTCAAACGTATCATGAAGTCCCAGTTAGAAACTGGAGCTCCTT 21382
||||| | || || || | |||||| ||||||||||||| | ||||| || | ||||
Sbjct 12218 TTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACGCCTT 12277
Query 21383 ATATGTTCTATCGTGATACTGTCAATAGAGCTAACCCTAATAAACATAAAGGTATGATAT 21442
| |||||||| || ||||| ||||| | | || || || || | || ||| | |
Sbjct 12278 ACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACACGGCATGGTGT 12337
Query 21443 ATTGCTCTAACTTATGTACTGAAATAATGCAGAACATGAAGC--CGACTATTATCGAAAC 21500
| | || ||| | ||||||||||| ||||||||| || | | || | | ||||
Sbjct 12338 ACTCTTCCAACCTTTGTACTGAAATCATGCAGAAC--CAATCTGCAACGGTAGTTGAAAA 12395
Query 21501 TGAAGAAATCGTAACTAGAGAAGATGGTCAAAAGCGTATCGTTACTACTAAAATCCCTGG 21560
||||| ||||||| | ||||||| |||| || ||||| | | | ||| | || ||
Sbjct 12396 GGAAGAGCTCGTAACCA---AAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 12452
Query 21561 TGATTTCGTAGTATGTAA-CTTAGCTTCATT 21590
|||||||||||||| || || | || ||||
Sbjct 12453 CGATTTCGTAGTATGCAATCTGAACTCCATT 12483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 709946210115360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |