Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_031245.1 Length=221908 Score E Sequences producing significant alignments: (Bits) Value seq3027 114 2e-20 >seq3027 Length=236980 Score = 114 bits (126), Expect = 2e-20 Identities = 191/271 (70%), Gaps = 9/271 (3%) Strand=Plus/Plus Query 21324 TTCAG-CTATCGATATATTCAAACGTATCATGAAGTCCCAGTTAGAAACTGGAGCTCCTT 21382 ||||| | || || || | |||||| ||||||||||||| | ||||| || | |||| Sbjct 12218 TTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACGCCTT 12277 Query 21383 ATATGTTCTATCGTGATACTGTCAATAGAGCTAACCCTAATAAACATAAAGGTATGATAT 21442 | |||||||| || ||||| ||||| | | || || || || | || ||| | | Sbjct 12278 ACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACACGGCATGGTGT 12337 Query 21443 ATTGCTCTAACTTATGTACTGAAATAATGCAGAACATGAAGC--CGACTATTATCGAAAC 21500 | | || ||| | ||||||||||| ||||||||| || | | || | | |||| Sbjct 12338 ACTCTTCCAACCTTTGTACTGAAATCATGCAGAAC--CAATCTGCAACGGTAGTTGAAAA 12395 Query 21501 TGAAGAAATCGTAACTAGAGAAGATGGTCAAAAGCGTATCGTTACTACTAAAATCCCTGG 21560 ||||| ||||||| | ||||||| |||| || ||||| | | | ||| | || || Sbjct 12396 GGAAGAGCTCGTAACCA---AAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 12452 Query 21561 TGATTTCGTAGTATGTAA-CTTAGCTTCATT 21590 |||||||||||||| || || | || |||| Sbjct 12453 CGATTTCGTAGTATGCAATCTGAACTCCATT 12483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709946210115360