Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq1440 104 3e-17 seq3027 93.3 5e-14 >seq1440 Length=381215 Score = 104 bits (114), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476 ||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||| Sbjct 321122 TTTGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTC 321181 Query 157477 GAATCCAGCCTGAGACG 157493 |||||| |||| |||| Sbjct 321182 GAATCCCTCCTGGGACG 321198 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157419 TGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGA 157478 |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct 328852 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 328793 Query 157479 ATCCAGCCTGAGACGCCA 157496 |||| |||| |||| || Sbjct 328792 ATCCCTCCTGGGACGTCA 328775 >seq3027 Length=236980 Score = 93.3 bits (102), Expect = 5e-14 Identities = 171/246 (70%), Gaps = 20/246 (8%) Strand=Plus/Minus Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476 |||| ||| |||||||| ||| ||||||| ||| ||| ||| ||| |||| ||||| Sbjct 236805 TTTGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 236747 Query 157477 GAATCCAGCCTGAGACGCCAGT--------CGGTA-TGGCGGAATTGGTAGACGCGCTGG 157527 || || | ||| | ||| | |||| |||||||||||| |||||||| | Sbjct 236746 GAGCCCTTCATGACTCACCATTATATTTTGCGGTCGTGGCGGAATTGGCAGACGCGCACG 236687 Query 157528 GTTTAGGTTCCAGTGTCCT-TGCGACGTGGAGGTTCAAGTCCTCT-TACCG------ACA 157579 ||| |||| | ||| || | ||||||||||| |||||||| |||| | | Sbjct 236686 GTTCAGGTCCGTGTGGGCTAACCCCCGTGGAGGTTCGAGTCCTCTCGACCGCACCATATA 236627 Query 157580 TTGCCCGAA--TAGCGCAGCGGTAGCGCACCTCCTTTACACGGAGATGGTCGGGGGTTCG 157637 || || | | || ||||||||| ||| | |||| || || || ||||| ||||||| Sbjct 236626 TTTTGCGGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCG 236567 Query 157638 AATCCC 157643 | |||| Sbjct 236566 ATTCCC 236561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596280835767920