Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 104 3e-17
seq3027 93.3 5e-14
>seq1440
Length=381215
Score = 104 bits (114), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476
||||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||
Sbjct 321122 TTTGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTC 321181
Query 157477 GAATCCAGCCTGAGACG 157493
|||||| |||| ||||
Sbjct 321182 GAATCCCTCCTGGGACG 321198
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 157419 TGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGA 157478
|||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct 328852 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 328793
Query 157479 ATCCAGCCTGAGACGCCA 157496
|||| |||| |||| ||
Sbjct 328792 ATCCCTCCTGGGACGTCA 328775
>seq3027
Length=236980
Score = 93.3 bits (102), Expect = 5e-14
Identities = 171/246 (70%), Gaps = 20/246 (8%)
Strand=Plus/Minus
Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476
|||| ||| |||||||| ||| ||||||| ||| ||| ||| ||| |||| |||||
Sbjct 236805 TTTGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 236747
Query 157477 GAATCCAGCCTGAGACGCCAGT--------CGGTA-TGGCGGAATTGGTAGACGCGCTGG 157527
|| || | ||| | ||| | |||| |||||||||||| |||||||| |
Sbjct 236746 GAGCCCTTCATGACTCACCATTATATTTTGCGGTCGTGGCGGAATTGGCAGACGCGCACG 236687
Query 157528 GTTTAGGTTCCAGTGTCCT-TGCGACGTGGAGGTTCAAGTCCTCT-TACCG------ACA 157579
||| |||| | ||| || | ||||||||||| |||||||| |||| | |
Sbjct 236686 GTTCAGGTCCGTGTGGGCTAACCCCCGTGGAGGTTCGAGTCCTCTCGACCGCACCATATA 236627
Query 157580 TTGCCCGAA--TAGCGCAGCGGTAGCGCACCTCCTTTACACGGAGATGGTCGGGGGTTCG 157637
|| || | | || ||||||||| ||| | |||| || || || ||||| |||||||
Sbjct 236626 TTTTGCGGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCG 236567
Query 157638 AATCCC 157643
| ||||
Sbjct 236566 ATTCCC 236561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596280835767920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |