Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2705 223 4e-53
seq2678 174 2e-38
>seq2705
Length=231
Score = 223 bits (246), Expect = 4e-53
Identities = 174/205 (85%), Gaps = 6/205 (3%)
Strand=Plus/Plus
Query 8430 CCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTT- 8488
||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 1 CCTCAGCCTCCCGAGTAGCTGGGATTATAGGCACCTGCCACCACGCCTGGCTAATTTTTT 60
Query 8489 GTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACC 8548
|||||||||||||||| |||||| || |||| |||||| ||||||| | |||||||||
Sbjct 61 GTATTTTTAGTAGAGATGCGGTTTCGCCGTGTTAGCCAGGATGGTCTCCATCTCCTGACC 120
Query 8549 TCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGC 8608
| |||||||| || | ||| ||||||||||||||| ||||||||||||||||||||| |
Sbjct 121 T--TGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCACCAC 178
Query 8609 GCCTGGCCCTTTAAAAAGTTTTCTT 8633
||| ||||| ||||| | |||||
Sbjct 179 GCCCGGCCC---AAAAAATGTTCTT 200
>seq2678
Length=237
Score = 174 bits (192), Expect = 2e-38
Identities = 149/187 (80%), Gaps = 13/187 (7%)
Strand=Plus/Plus
Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408
|||||| ||||||||||||||||||||| ||||| ||||||||||||||| | |||
Sbjct 64 CTCTGTCACCCAGGCTGGAGTGCAGTGGCACTATCTCAGCTCACTGCAACCTCTGATTCC 123
Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468
| |||||||| |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 124 CTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACGCGCC 183
Query 8469 ACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGG 8528
||||| || || ||||||||||| || |||||||||||||||||||
Sbjct 184 ACCACACC-------------CATCTTTAGTAGAGATGGGATTTCACCATGTTGGCCAGG 230
Query 8529 CTGGTCT 8535
||||||
Sbjct 231 ATGGTCT 237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521464943711800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |