Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2705 223 4e-53 seq2678 174 2e-38 >seq2705 Length=231 Score = 223 bits (246), Expect = 4e-53 Identities = 174/205 (85%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 8430 CCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTT- 8488 ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||| Sbjct 1 CCTCAGCCTCCCGAGTAGCTGGGATTATAGGCACCTGCCACCACGCCTGGCTAATTTTTT 60 Query 8489 GTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACC 8548 |||||||||||||||| |||||| || |||| |||||| ||||||| | ||||||||| Sbjct 61 GTATTTTTAGTAGAGATGCGGTTTCGCCGTGTTAGCCAGGATGGTCTCCATCTCCTGACC 120 Query 8549 TCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGC 8608 | |||||||| || | ||| ||||||||||||||| ||||||||||||||||||||| | Sbjct 121 T--TGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCACCAC 178 Query 8609 GCCTGGCCCTTTAAAAAGTTTTCTT 8633 ||| ||||| ||||| | ||||| Sbjct 179 GCCCGGCCC---AAAAAATGTTCTT 200 >seq2678 Length=237 Score = 174 bits (192), Expect = 2e-38 Identities = 149/187 (80%), Gaps = 13/187 (7%) Strand=Plus/Plus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||| ||||||||||||||||||||| ||||| ||||||||||||||| | ||| Sbjct 64 CTCTGTCACCCAGGCTGGAGTGCAGTGGCACTATCTCAGCTCACTGCAACCTCTGATTCC 123 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468 | |||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct 124 CTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACGCGCC 183 Query 8469 ACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGG 8528 ||||| || || ||||||||||| || ||||||||||||||||||| Sbjct 184 ACCACACC-------------CATCTTTAGTAGAGATGGGATTTCACCATGTTGGCCAGG 230 Query 8529 CTGGTCT 8535 |||||| Sbjct 231 ATGGTCT 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521464943711800