Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2971 123 2e-23 seq3060 114 9e-21 seq3038 89.7 4e-13 >seq2971 Length=246349 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| ||| || ||| |||||| |||||||||||||| | ||| || |||| Sbjct 200356 CAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTC 200297 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| ||||| ||||| | ||||||||| || | || | || ||||| || Sbjct 200296 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 200237 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| | | | || ||||||| |||||||| || | || || || Sbjct 200236 TTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGT 200177 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||| ||||| ||||| |||||||| Sbjct 200176 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || || || ||||||||||| |||| || || | || || Sbjct 200125 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 200066 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || ||||| |||| |||||||| || | || | ||| ||||| ||| Sbjct 200065 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 200006 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| || ||| | ||||||||| ||| || ||||| | || || ||| Sbjct 200005 GATCTTCGACTTGACATTGT--CGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 199948 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||| |||||||| ||||| Sbjct 199947 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 199916 Score = 107 bits (118), Expect = 1e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||||||||||| ||||||||||| |||| || ||| |||| || Sbjct 199896 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 199837 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || ||||| || ||||| || | || | |||||||| ||| Sbjct 199836 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 199777 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||||| || || ||||| | ||||| ||||| Sbjct 199776 ATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 199717 Query 44309 CCCGTGA 44315 || |||| Sbjct 199716 CCGGTGA 199710 >seq3060 Length=213164 Score = 114 bits (126), Expect = 9e-21 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 44142 TGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGG 44201 ||| | |||| |||||||| || |||| ||| ||| | || |||| |||||| || | Sbjct 59192 TGCACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 59251 Query 44202 CAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT-- 44259 | ||||||||||||||||| || | || | || ||||| ||| ||||| ||| Sbjct 59252 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 59311 Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319 || ||| | ||||||||| || || ||||| | ||| || ||||| || |||||||| Sbjct 59312 CATTGT--CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGT 59369 Query 44320 CTTCACGAAGATTTGC 44335 ||| |||||| | ||| Sbjct 59370 CTTTACGAAGCTGTGC 59385 >seq3038 Length=227906 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| || |||||||| |||| ||| ||| | || || Sbjct 26316 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 26375 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| |||||||| || | || | || ||||| || || Sbjct 26376 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCTGT 26434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359974881826329