Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3038 138 1e-27
seq2971 131 2e-25
seq3060 129 5e-25
>seq3038
Length=227906
Score = 138 bits (152), Expect = 1e-27
Identities = 111/134 (83%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || |||||||||||||||||||| |||||||||
Sbjct 26298 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 26357
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || |||||||||||||||||||| |||| |||||| ||||||| |||
Sbjct 26358 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 26417
Query 41756 ACGCTCTCCTTGTC 41769
| | |||||||||
Sbjct 26418 ATTCCCTCCTTGTC 26431
>seq2971
Length=246349
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| ||||| ||| ||||||||| ||||| || || ||
Sbjct 200371 GCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 200312
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || |||| || ||||||||||||||||| || || ||||| ||||||| ||
Sbjct 200311 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 200252
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| ||| ||| ||| | | | |||||| || ||||
Sbjct 200251 GATGCCCTCCTTGTCTTGGATCTTTGACTT-GACGTTGTCGATCGTGTCGGATGATTCCA 200193
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || || || ||||| |||||||| |||||
Sbjct 200192 CTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144
Score = 125 bits (138), Expect = 7e-24
Identities = 153/205 (75%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || ||||| || |||||||||||||| ||||| ||||||||
Sbjct 199914 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 199855
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| |||||||||||||| ||||| |||| ||| || ||||| | |||
Sbjct 199854 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 199795
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813
| || ||||| ||| ||| || ||||| | | || | |||||| |||||| |
Sbjct 199794 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTATCG--ATGGTGTCGGACGACTCAA 199737
Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838
|||| | || || || || || ||
Sbjct 199736 CCTCGAGGGTAATGGTCTTGCCGGT 199712
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || || ||||| ||||| ||||||||
Sbjct 200142 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 200083
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || |||||||||||||| || || ||||||||||| ||||| | ||
Sbjct 200082 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 200023
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| || ||| || | || | |||||||| ||||| |
Sbjct 200022 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATGGTGTCGCTGGACTCGA 199965
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || || || ||||| ||||| ||||||||
Sbjct 199964 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 199916
>seq3060
Length=213164
Score = 129 bits (142), Expect = 5e-25
Identities = 143/189 (76%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 41667 TGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGG 41726
||| | ||||||| ||||||||||||||||||||||| | || || | |||||| || |
Sbjct 59192 TGCACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 59251
Query 41727 CGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT-- 41784
|||| |||| ||||| ||||||| || | | |||||||||| ||| || |||
Sbjct 59252 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 59311
Query 41785 CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGT 41844
|| | || | |||||||||||||| ||||| | ||| || || || || || || ||
Sbjct 59312 CATTGTCG--ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGT 59369
Query 41845 CTTTACGAA 41853
|||||||||
Sbjct 59370 CTTTACGAA 59378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462283560384400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |