Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07-
28] 132 sequences; 30,154,641 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq38 435 3e-117
seq55 185 8e-42
seq100 111 1e-19
seq67 86.0 6e-12
>seq38
Length=777079
Score = 435 bits (482), Expect = 3e-117
Identities = 1034/1547 (67%), Gaps = 40/1547 (3%)
Strand=Plus/Minus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511
|||| || || || |||||||| | ||| || || || |||||||||| |||| | |
Sbjct 235625 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 235566
Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571
| ||||| | || || |||| ||||| | |||||| || || ||||||||||| |
Sbjct 235565 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 235506
Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631
|| |||||||| | || ||||||| | || || | |||||| | ||||||||
Sbjct 235505 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 235446
Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689
| || |||| || ||| ||| ||||||| ||||| || | | |||| |||| |
Sbjct 235445 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 235390
Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749
|| |||| ||| || ||||| ||||| || | ||||| ||||| |||||
Sbjct 235389 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 235331
Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805
| || | | ||| || ||||| || || | | || | || ||| |||||
Sbjct 235330 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGA 235271
Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865
||| | ||||| || | || ||| || || || | ||| | || || | ||
Sbjct 235270 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 235215
Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923
| || ||||||| | || | |||| |||||| || | || || | ||
Sbjct 235214 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGAT 235157
Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983
||||| || |||||| ||| | || || | ||| || | | ||
Sbjct 235156 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 235097
Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038
||| |||| | |||| || | || | || | || | ||| || ||||||
Sbjct 235096 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 235039
Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098
|| || || ||||| ||| | | |||||| | || || || || | ||| | |
Sbjct 235038 CAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 234979
Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158
|| || ||||| | ||| |||| ||||| || || ||| | |||||||| || |||
Sbjct 234978 TTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 234919
Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218
| || ||||| |||||| ||||| ||||| || || ||| || ||||||| ||
Sbjct 234918 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 234859
Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277
|| |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| |
Sbjct 234858 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 234800
Query 23278 ACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337
||||||| || | ||| || || ||| | || ||||| ||| |||| | ||
Sbjct 234799 ACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTT 234740
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
| ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| ||
Sbjct 234739 CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC 234680
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
|| || || || || || |||||| | |||| || | || ||||| |||||
Sbjct 234679 ACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATG 234620
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || |||||
Sbjct 234619 CCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTA 234560
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577
||| || |||||||| || |||| |||||| || || ||||||||||| | |||| |
Sbjct 234559 ACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGT 234500
Query 23578 GCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636
| |||||| | || ||| | || | | ||||||||| || | ||| || || ||
Sbjct 234499 G-CCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAG 234441
Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696
| || || ||||| || ||| || || || |||||||| || || |||||||| |
Sbjct 234440 CGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCAT 234381
Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756
| || | || |||||||| || || | | ||||| | || ||| | || ||| |
Sbjct 234380 CCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAA 234321
Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814
|||| || || || || ||||| | || |||||| ||| ||||| || || || ||
Sbjct 234320 GTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCAATCGC 234263
Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874
|| |||||||| || || || || |||| || || ||||| ||||| | ||| |||||
Sbjct 234262 TGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCT 234203
Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931
|||| ||| | ||||| |||| ||| || ||||| || | || || || || ||
Sbjct 234202 CTCGGCAACCTT---GCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCC 234146
Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| || | ||||| ||||| || || | || |||||||| ||||
Sbjct 234145 GAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 234099
>seq55
Length=447353
Score = 185 bits (204), Expect = 8e-42
Identities = 561/858 (65%), Gaps = 23/858 (3%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||||||||| || || || || ||||| | || || | || |||
Sbjct 251625 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 251566
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | | |||| || || || || || |
Sbjct 251565 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 251506
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| |
Sbjct 251505 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 251446
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || ||||| | ||||||| ||||||| ||||| || || | ||
Sbjct 251445 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 251386
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864
|| ||| | || || || | ||||| || ||||||||||| ||| | | || ||| |
Sbjct 251385 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 251326
Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924
| ||| | || |||||||| || ||||| | || || ||| || |||||| |
Sbjct 251325 CAGCGAA-CATAC-CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 251268
Query 57925 AGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980
| ||| | | |||||| | ||| | | || |||||| | || ||
Sbjct 251267 ACTGGGCGTTGCGATGGATTTCTGACAAGAACT----CGACATTCGCCCTCCGTCTCATT 251212
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| || |||||||| || ||||| ||||| || || ||||| || || || ||| ||
Sbjct 251211 GCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 251152
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
|||||||| || || ||| |||| || || || |||||| | || || || || |||
Sbjct 251151 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 251092
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160
|| | || || || || || ||||| ||| ||| || | || || |||| | |
Sbjct 251091 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 251032
Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220
| | | | ||| ||||||||||| ||| ||||||| | ||||| | || ||
Sbjct 251031 GCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 250972
Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278
|| || || | || | || || |||||| || | |||||| | |||||||| |
Sbjct 250971 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 250914
Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336
| || ||||| | || || | | ||| | ||| || |||||| | | ||
Sbjct 250913 TCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 250856
Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396
|| || || || ||| | || ||||| | |||||||| ||||| ||||| ||
Sbjct 250855 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 250796
Query 58397 aGTTAGCGAATATCAAAA 58414
||| |||| || || ||
Sbjct 250795 TGTTGGCGAGTACCAGAA 250778
>seq100
Length=1030212
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | |||
Sbjct 662416 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 662357
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || || || |||||||| ||| | || || |||||
Sbjct 662356 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 662298
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| ||
Sbjct 662297 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 662238
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || ||||| || |||| ||
Sbjct 662237 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 662205
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || ||||| || |||||| |||| || || | |
Sbjct 662644 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 662585
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| || | || || ||||||
Sbjct 662584 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 662525
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || ||||| ||| | || || | ||| || ||| || |||
Sbjct 662524 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 662465
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||||||||| || |||| ||| | || | || ||||
Sbjct 662464 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 662416
>seq67
Length=1513308
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 6/149 (4%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||||||||| || || ||||| || ||||| |||| || || || ||||| ||
Sbjct 1106280 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 1106221
Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318
|| | ||||| ||| || | | ||||||||| || | || || ||||||||||||
Sbjct 1106220 GACAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 1106164
Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347
| || |||||||| || |||||||| ||
Sbjct 1106163 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 1106135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765664485440
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