Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07-
28] 132 sequences; 30,154,641 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq38 129 1e-24
>seq38
Length=777079
Score = 129 bits (142), Expect = 1e-24
Identities = 418/638 (66%), Gaps = 12/638 (2%)
Strand=Plus/Minus
Query 94393 CCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCG 94452
|| |||||||| |||||| |||||||| | |||| ||||| || || | || ||
Sbjct 234846 CCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCC 234787
Query 94453 GAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCC-TTC-ACTC 94510
|| || |||||||| |||| |||||||||||| | |||| | || | ||| || |
Sbjct 234786 GACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTG--CCGTTCTGTTCGACAC 234729
Query 94511 TCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTT 94570
|| ||| |||||||| | | ||||| ||| ||| | ||| | || | | ||||
Sbjct 234728 GCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTT 234669
Query 94571 CATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAA 94630
| || || ||||| | ||| || || | | | ||||| |||||| ||
Sbjct 234668 CCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAA 234609
Query 94631 TATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGA 94690
|||||||| ||| ||| | ||||| || |||||| ||| | ||| |
Sbjct 234608 GGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGT 234549
Query 94691 CGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGG--GTACCACTCCATGACGA-AA 94747
|||| ||| | | || | | | ||||| | ||| || || | || || ||
Sbjct 234548 TGTTATAGACTCGTAGCATTGGTACAAGACC--GTTGGATGTGCCGTTTG-TGCCGCCAA 234492
Query 94748 TGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGG 94807
|| ||| | ||||| | | |||| || | || | || ||||| ||||||
Sbjct 234491 TGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGG 234432
Query 94808 AGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGC 94867
|||| || || ||| || ||||| || ||||| |||||||| ||||| | | |
Sbjct 234431 AGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGG 234372
Query 94868 CCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGTGTGGGG 94926
||| | |||||| || | || || | |||| || ||| | | || ||||| ||
Sbjct 234371 CCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGG-GTACCAGCACTGAAAAGTGTTGGC 234313
Query 94927 GAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATG 94986
|||||||| || || || | | ||||||| | ||||| ||||| | | || |||
Sbjct 234312 GAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATG 234253
Query 94987 TCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || ||||||||||||||||||||||| |||||
Sbjct 234252 TCTTCCCCATGAATGCCGACAGCCACACGCATGATCAT 234215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582326366060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |