Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07-
28] 132 sequences; 30,154,641 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq38 156 6e-33
>seq38
Length=777079
Score = 156 bits (172), Expect = 6e-33
Identities = 733/1150 (64%), Gaps = 22/1150 (2%)
Strand=Plus/Minus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| || |||||||| || || || ||||||| | | | | || | || || |||
Sbjct 235056 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 234997
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||||| | |||| | ||||||||| || | ||| | ||||| ||||| |||
Sbjct 234996 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 234937
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|| ||||| || ||||| || || || || || || |||| | || | ||| || | |
Sbjct 234936 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 234877
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGTATTGTGTA 71934
|| | |||| | | | | | ||| |||||| || || |
Sbjct 234876 CATATTTTCTGAGCACGAACCGTCTCACGG---CCCTTGCCTTCTCTCTCATAACGCTCG 234820
Query 71935 TATAA-TCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993
|| | || || ||||||||| || || ||| | ||||| ||||| || || ||
Sbjct 234819 TACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCA 234761
Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053
||||| | ||| || | | | || || | |||||||||||| |||||||| ||
Sbjct 234760 CATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAG 234701
Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113
||| || | ||| | | | | || || ||||| ||||| ||| || |
Sbjct 234700 AGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCAT 234641
Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173
|||| ||| | || | ||||||||| || | ||| ||||| | | | || || || ||
Sbjct 234640 GAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTT 234581
Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233
||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | ||
Sbjct 234580 GTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAG 234521
Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAA- 72292
||| ||||||| || || || ||| || || || |||| | || ||| ||
Sbjct 234520 ACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAAC 234461
Query 72293 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 72352
||| ||||| || || || || | || ||||| | || ||| || | ||||| |
Sbjct 234460 ATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGT 234402
Query 72353 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412
|||| || || || || |||||| ||||| | | || ||| || | | || |
Sbjct 234401 AGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-C 234346
Query 72413 GACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468
| || || || ||| | || | || || ||||| || || || | || |||
Sbjct 234345 GCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGAC 234286
Query 72469 A-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527
| |||| ||||| |||||||| |||| ||| || || ||| || || || || ||
Sbjct 234285 ATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 234227
Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587
|||||| | ||| || || ||||| || | | |||| | ||| | | | ||| ||
Sbjct 234226 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 234167
Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647
| |||| ||| || || || || || | ||| ||||| || || || | ||| |
Sbjct 234166 TCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 234107
Query 72648 CGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCG 72706
||| || || | ||| | || | || | | || | || ||| || || |
Sbjct 234106 CGAGTTCAGCTCATCTGAGTGCTTCATGACGGTCGCGTACGT-CTCCTCTGAGATCATGG 234048
Query 72707 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 72766
||| | || || | || ||||| | || | ||| ||||| | || || |
Sbjct 234047 GAGCCTTCTTGCCCGTCTTTGGATTGATGTATGCGTATAGATCCTGGACAACAGCAGAGA 233988
Query 72767 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 72826
|| | || || || | |||||| || || || ||||| || | ||||| || || ||||
Sbjct 233987 ATTGCTTCTTGGTCTGCTTGTGGAGGTTGGACACGGCGATACGCGCGGCGAGGATCGCAT 233928
Query 72827 AATCTGGATG 72836
||||||| ||
Sbjct 233927 AATCTGGGTG 233918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138092620320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |