Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq38 304 3e-77 seq55 89.7 1e-12 seq42 89.7 1e-12 seq67 87.8 5e-12 >seq38 Length=777079 Score = 304 bits (336), Expect = 3e-77 Identities = 1157/1795 (64%), Gaps = 52/1795 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| || Sbjct 234143 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 234201 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | ||||| || ||| | |||||||| ||| | || || ||| | || |||| || Sbjct 234202 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 234261 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564 |||||||| ||||| || ||| || |||| ||| ||||| || || ||||| Sbjct 234262 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 234316 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| | | || |||||| || | | | ||| | | || ||||| | | ||| Sbjct 234317 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 234376 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||| || ||||||| || || || |||| ||||| | || |||||| Sbjct 234377 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 234436 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 || || ||||| |||||| | | ||||| | | || |||| | |||||| | Sbjct 234437 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 234495 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||||| || || || || || || || ||||| || || | | |||| ||||| Sbjct 234496 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 234555 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||||||||| ||||| ||| || ||||| || || || ||||| Sbjct 234556 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 234615 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||| || | | |||| | || || || || ||| ||||| || ||| | Sbjct 234616 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 234675 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| || ||| ||||||| || || ||| || | || | |||||| |||| || || Sbjct 234676 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 234735 Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 ||| | | |||| | || | ||||| ||||||| || ||||| || ||||| | Sbjct 234736 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 234794 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 |||||||| | | || ||||| ||||| || || |||| ||| ||| Sbjct 234795 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 234854 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | ||| || ||||| |||||| ||| || | || |||||| ||||| || |||| Sbjct 234855 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 234914 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | || ||||||| || | |||||||||| ||| ||| || | ||||| || | Sbjct 234915 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 234974 Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 ||| ||||| || | || || ||||| || || ||| | ||||| || ||| | Sbjct 234975 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 235031 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331 | || || || || || ||| | || || || | | || | || ||| Sbjct 235032 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 235089 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 ||||||| | || | ||| | || || ||| | | || | || || ||||| Sbjct 235090 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 235149 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450 ||||| | || || || ||| | || || || ||| | | || | || || || | Sbjct 235150 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 235208 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | |||||||||||||| | || || ||||| | || || ||| ||| |||| | Sbjct 235209 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 235268 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | |||||||| || | || |||| |||| ||||| || || ||| ||| || Sbjct 235269 ACTCGCCTGAGGCCAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTC 235328 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 | ||||| || || | || | | || ||| || || || || | Sbjct 235329 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 235388 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 | | |||||||| | |||||| || | ||| || || | | || ||| Sbjct 235389 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 235448 Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741 |||||| ||| || ||| | |||| |||| ||| |||||||| | Sbjct 235449 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 235502 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 ||||| ||||| ||||| || || || || | |||||| | || |||||||||| Sbjct 235503 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 235559 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 |||| || | |||||||| |||| || || || || | | || || || | ||| | Sbjct 235560 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 235619 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 | || | || | |||||||| |||||| || || ||| || | |||||||| Sbjct 235620 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 235679 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981 || |||||||| | ||||| || | ||| ||| || ||||||| || || | Sbjct 235680 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 235739 Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041 || | | ||||| ||||| ||||| || | ||| | || | | ||||| || | Sbjct 235740 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 235799 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 | || |||||||||||| ||| ||| || ||| | |||| |||||||| Sbjct 235800 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCATATGAAGGAGCCAACCA 235859 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| |||| |||||| ||| || ||||| |||||| ||||| || Sbjct 235860 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 235914 >seq55 Length=447353 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496 ||||| || |||||| || |||||| |||| |||| ||||||| ||||| Sbjct 251274 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 251216 Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556 ||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| || Sbjct 251215 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 251156 Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616 ||| || ||||||| | ||| | || || || || || || ||| | || ||| || Sbjct 251155 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 251096 Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||| | || || || || || || Sbjct 251095 TGAGGGCATGCACACAGACTTCGCCTG 251069 >seq42 Length=639572 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474 |||| || | || ||||| || || || || || || | ||||| || || || || | Sbjct 104182 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 104123 Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532 |||| ||| || ||| || ||||| || || ||||| ||||||||||| |||||||| Sbjct 104122 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 104065 Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591 || || ||||||||| |||||| || || ||| || ||| || | || Sbjct 104064 AGCCGAATACAAAACCTGCCACGACGACTACATCGGCCAAGGAGTCGACCAACTAGCCGA 104005 Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651 | || || | || | ||||| ||||| | |||||| || || | ||||| |||| Sbjct 104004 A-GTAATCCACAAACTCAAGAATAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 103946 Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692 |||| | | | |||||||| || ||||| || ||| Sbjct 103945 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 103905 >seq67 Length=1513308 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 |||||| | || | ||| || ||| ||| ||||| ||||| || |||| ||| Sbjct 68188 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 68129 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||||||||||||| | | |||||| || || |||||||||| |||||||||||| || Sbjct 68128 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 68069 Query 65991 CATTGCAGAAAAGAAAAACTC 66011 ||| || ||||| ||||| Sbjct 68068 CATGGCGTGGAAGAAGAACTC 68048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351395703224