Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq38 163 3e-35 seq100 134 1e-26 seq67 107 2e-18 seq57 105 6e-18 >seq38 Length=777079 Score = 163 bits (180), Expect = 3e-35 Identities = 916/1447 (63%), Gaps = 37/1447 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| |||||||||||||| | || | ||| ||| | || Sbjct 235623 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 235564 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||||||| ||||| ||| || | ||||| || || ||||| ||| || Sbjct 235563 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 235504 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| ||||||| ||| | |||| || | |||| ||||| Sbjct 235503 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 235444 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || || || || | |||||||||||||||| | ||||| || | | || Sbjct 235443 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 235385 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | |||| | || | || | || |||||||| ||||| |||| Sbjct 235384 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 235326 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | | ||| || ||||| ||| || | || ||| | | || ||| ||| Sbjct 235325 CAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGA 235266 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||| || | || ||||| || || || | | || | || ||||| | Sbjct 235265 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 235206 Query 145476 GATGTTTCATGTTGCTCAT-----CCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530 | || | ||||||| | |||| ||| | ||| | | ||| ||||| Sbjct 235205 GGTGGCGGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTA-GTTGAT----CTCGAT 235151 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590 | || |||| ||| || || || || || | | | | || | |||||||| Sbjct 235150 GGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA 235091 Query 145591 CCGAGCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647 | ||||| || | | | || || | | || | ||| |||| ||| || || Sbjct 235090 ---AACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGAC 235034 Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707 || ||| || | | ||| | | |||||| | ||||||||| | ||||| Sbjct 235033 AGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGAT 234974 Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767 ||| || ||||| | |||||| || || | |||| ||||||||||| || ||| | || Sbjct 234973 GGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGG 234914 Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACC 145825 | ||| ||||| ||||| ||| | ||| | || | | | ||| ||||| ||| Sbjct 234913 TGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACC 234856 Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 || || ||| ||| || || | ||| ||||||| ||| || |||| Sbjct 234855 GTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCG 234796 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 || ||| ||||| || || || | |||||| |||||||| | ||| |||||| Sbjct 234795 TAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGT 234736 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005 | ||| |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| | Sbjct 234735 TCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACG 234677 Query 146006 CAATCCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCC 146063 | | || ||||| ||| || | | | || || || ||| || |||| Sbjct 234676 AACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCATGCC 234618 Query 146064 ACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGAC 146120 |||| |||| |||| ||| | || ||| || |||||||||||||| |||| || Sbjct 234617 ACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAAC 234558 Query 146121 GTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAG 146180 | | |||||||| |||| || | ||| || | | ||| ||| | |||||| || Sbjct 234557 GAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGC 234498 Query 146181 AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGT 146240 | || | ||| || | | | ||||||| | || | |||||| ||| Sbjct 234497 CGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGT 234438 Query 146241 ACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCT 146298 |||||| || ||| || ||| || |||||||| || |||||||| || || Sbjct 234437 TCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCT 234378 Query 146299 TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAA 146358 || ||| | | || ||||| || | ||||||| || || || || ||| | Sbjct 234377 TC--ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAG 234320 Query 146359 CGTCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGT 146417 || || || || || || | ||| | ||| || || || || || Sbjct 234319 TGTTGGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTG 234261 Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477 ||| |||||| || ||||||||||| | ||| || ||||||| ||| ||||| || | || Sbjct 234260 CTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCT 234201 Query 146478 CCGCCAC 146484 | || || Sbjct 234200 CGGCAAC 234194 >seq100 Length=1030212 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| | Sbjct 662418 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 662477 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||||||||| | || | ||||||||||| || ||| Sbjct 662478 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 662537 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || ||| ||||||||| Sbjct 662538 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 662597 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 662598 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 662644 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| || || | || |||||||| || ||||||||||| Sbjct 662189 GCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 662248 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 662249 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 662308 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| || || | Sbjct 662309 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 662368 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || || || |||||||| ||||| Sbjct 662369 TTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 662416 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||| ||||||||||| ||| | Sbjct 662646 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 662705 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||||||| | || || || |||||||| || || Sbjct 662706 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 662765 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | || |||| ||||| | Sbjct 662766 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 662825 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||||| ||| || ||||| Sbjct 662826 TCGAGGGTAATGGTCTTGCCGGT 662848 >seq67 Length=1513308 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 || |||| || |||||||| ||| | |||||| ||||| | |||||| || ||| Sbjct 1106097 ACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 1106156 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| | Sbjct 1106157 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 1106216 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 || | || ||| | ||||||| |||| || | ||| || || || || || |||| Sbjct 1106217 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 1106276 Query 131222 CGAA 131225 |||| Sbjct 1106277 CGAA 1106280 >seq57 Length=417519 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| |||||| ||||||||||| ||| Sbjct 229585 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 229644 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| || Sbjct 229645 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 229704 Query 131128 ATTCCTTCTTTGTCGGTG 131145 ||||| || ||||| ||| Sbjct 229705 ATTCCCTCCTTGTCTGTG 229722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012021178880