Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07-
28] 132 sequences; 30,154,641 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq55 172 6e-38
>seq55
Length=447353
Score = 172 bits (190), Expect = 6e-38
Identities = 487/732 (67%), Gaps = 21/732 (3%)
Strand=Plus/Plus
Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985
||| || || ||||| ||||| || ||||| | || ||||| || ||||| | | |
Sbjct 250903 ATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-CTTGC 250961
Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044
| || |||||||| |||||||| || | |||||| ||||| || | | ||| ||
Sbjct 250962 ATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG-CTC 251020
Query 93045 TTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGT 93101
| | | | |||| | || || | | | || | ||| | ||| || ||||
Sbjct 251021 TG-CACAAGGGCCTGGTTCGGCTTGTTCTTC-AGATGCGAGAACAGAAGGCAGGCGAAGT 251078
Query 93102 CGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161
| || || | || || || || || || | ||| || |||||| | || | | |
Sbjct 251079 CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGA 251138
Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221
| || |||||||| ||||| || || | ||||||| ||||| || || ||||| || |
Sbjct 251139 GACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCAA 251198
Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-CTGA--TCCATT 93278
|||| |||||||| | | ||| ||| || || || || || | || |||||
Sbjct 251199 CGGCGGCAAATGCAATGAGACGGAGGGCGAA---TGTCGAGTTCTTGTCAGAAATCCATC 251255
Query 93279 TTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAATAGG 93337
|| ||||| || || || | || || || | |||| ||||| || || || |||
Sbjct 251256 GCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGA-TGTTGTCGATGGCATTGAACAGG 251314
Query 93338 TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAA 93397
|| ||||| | | || | |||||||||||||| | || ||||| | || ||
Sbjct 251315 TATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAG 251374
Query 93398 TGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACT 93457
|||| |||||||| || ||||| |||||||| |||| || |||| |||||||||
Sbjct 251375 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACC 251434
Query 93458 TCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516
|| ||| || | ||| ||||| || || ||||| || ||||||||||| || || ||
Sbjct 251435 TC-AGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAA 251493
Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGA 93573
|| | | || || || | || || || || | |||| | ||| |||
Sbjct 251494 TGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTG 251553
Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633
||||| || || ||||| | || || | ||||| || || || || || ||||||||
Sbjct 251554 GAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTA 251613
Query 93634 CATATCCCATAT 93645
||| | ||||||
Sbjct 251614 CATTTGCCATAT 251625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859881179680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |