Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07-
28] 132 sequences; 30,154,641 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq55 288 2e-72
seq38 194 3e-44
seq78 87.8 3e-12
>seq55
Length=447353
Score = 288 bits (318), Expect = 2e-72
Identities = 579/848 (68%), Gaps = 22/848 (3%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367
|||||||| ||||| || ||| |||||| || ||||||||||| ||| | |||||
Sbjct 251616 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 251557
Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421
|||| | || | || ||| | | |||||| || ||| || | || |
Sbjct 251556 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 251501
Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481
|| || ||||||||||| || || ||||| ||||| |||||||| | | | ||||
Sbjct 251500 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 251441
Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
||||||||| | ||||| || |||||||||||||||||||| || |||||
Sbjct 251440 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 251381
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
| | ||||| ||| || || || || | || |||||| || || ||||
Sbjct 251380 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 251321
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| |||||||| ||||| || | || || |||||| | |||||| ||||||||
Sbjct 251320 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 251261
Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| | ||||| | | || | | || |||| | | || | || ||| |||
Sbjct 251260 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCG 251202
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779
|||| ||||| ||||||||||| || | || || | ||||||||||| ||| | |
Sbjct 251201 CCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 251142
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
|| || ||| |||| ||||| ||||||||||| |||||| | | || ||||| ||||
Sbjct 251141 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 251083
Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899
| ||||| |||||||| ||||||||| || || | | ||||||| ||| |
Sbjct 251082 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 251026
Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT- 42958
|| | | ||||||||| |||||||| ||||||| |||||||| | | ||| ||||
Sbjct 251025 GTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGA--CAGACGCTC 250968
Query 42959 GCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017
|| || || | || |||||| | |||||||| | ||||| | | |||||
Sbjct 250967 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCG 250908
Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCG 43077
|||| | || |||| | || || |||||||| | | ||||||||
Sbjct 250907 CCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCG 250848
Query 43078 ACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCG 43137
|||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| || | ||
Sbjct 250847 ACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCG 250788
Query 43138 ACTACCAG 43145
| ||||||
Sbjct 250787 AGTACCAG 250780
>seq38
Length=777079
Score = 194 bits (214), Expect = 3e-44
Identities = 480/722 (66%), Gaps = 21/722 (3%)
Strand=Plus/Minus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
||||| |||||||| || ||||| || | | ||||| | ||||| ||||| |
Sbjct 235047 GCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 234988
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||| || |||||||||||| || | || |||||| |||| |||| ||||||||||
Sbjct 234987 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTG 234928
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| || ||||| || ||||||||| ||| || |||| | | ||| | | |
Sbjct 234927 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 234868
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| |||||| || ||||||| ||| ||| || || |||||| ||| |
Sbjct 234867 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 234808
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|||||| || | || || || || ||||| || | |||||||| ||| |||
Sbjct 234807 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTG--GGGCACATCAGAGTCC 234750
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| |
Sbjct 234749 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 234690
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|| | | | || ||| ||| |||||| | || |||| || | | ||
Sbjct 234689 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 234630
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| | ||||| ||||| | ||||| || | || || || ||||||||||| ||||
Sbjct 234629 CGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 234570
Query 245166 GGTCCACCATCCTCTCGAGC-GCGTTG---AAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
||| || | | ||||| | |||| ||| || || | || || | |||||
Sbjct 234569 GGT----CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTG 234514
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281
|| |||||| ||||| ||||| | ||| || |||||| |||| || |||||
Sbjct 234513 GATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTG----TGAACATG 234458
Query 245282 ----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337
|| | ||||| |||| ||||||||| | ||| || |||||| ||| || ||
Sbjct 234457 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 234398
Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGG 245396
|| || |||||||| ||||||| | || |||||||| | ||||| | || |||
Sbjct 234397 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 234338
Query 245397 GG 245398
||
Sbjct 234337 GG 234336
>seq78
Length=1471894
Score = 87.8 bits (96), Expect = 3e-12
Identities = 100/131 (76%), Gaps = 4/131 (3%)
Strand=Plus/Minus
Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996
|||| ||||| |||||||||||||| || ||||||||||||||||||| || ||
Sbjct 60585 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 60527
Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054
||| || | || | | || ||||||| | |||| || || |||||||| || ||||
Sbjct 60526 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 60468
Query 243055 GGGAAGCCGCC 243065
||||||| |||
Sbjct 60467 GGGAAGCTGCC 60457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337641840320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |