Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq38 257 2e-63 >seq38 Length=777079 Score = 257 bits (284), Expect = 2e-63 Identities = 618/923 (67%), Gaps = 14/923 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||||||| || ||||| |||| || || ||| Sbjct 234131 AACTACCAGTACTTCGGCTTCAAGACTCTGGAGCGATCATACCTTCTCAGAATTGACGGC 234190 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||| ||||||| ||| || | ||||| || || |||| ||||| || | Sbjct 234191 AAGGTTGCCGAGAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAA 234250 Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGG 93892 ||||| | | | ||| | | | || ||||| | ||| | || |||| Sbjct 234251 GACATTGAAGCAGCGATTGAGA-CATACAACTACATGTCGTTGAAGTACTTCACACATG- 234308 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | | || || || |||| || || ||||| | | ||| | | || || ||| || Sbjct 234309 CTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGG 234368 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 || | | |||| ||| ||| || || | ||| | ||||||| ||||| | | Sbjct 234369 TGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGA 234428 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || |||| || || || || | ||| ||| || | | |||| || || | Sbjct 234429 TCTCCAAGAACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCAT 234488 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| |||| || || ||||| |||||||| || || || ||||| || |||| |||| Sbjct 234489 ACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACA 234548 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || ||||| ||||||||||| | | | ||| |||| || |||| | Sbjct 234549 ACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACC 234608 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGC-TTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | ||||| ||||| || ||||| || || ||||| ||||| || |||||||| || || Sbjct 234609 TTGAGCCGTGGCATGCAGACGT-CATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAG 234667 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | || | || | ||||||||||||||| | || || || |||||| | Sbjct 234668 GAAGAAGTTCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAG 234727 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || ||||| | ||| | | |||| ||| | || ||||| ||||| || || ||||| Sbjct 234728 CGTGTCGAACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCG 234787 Query 94372 GACGTTTGTGGATCGCGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 || |||| || | || || || || |||| | ||||| || | ||||||| Sbjct 234788 GATGTTTACGG-TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGG 234846 Query 94431 CAG---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | || |||| |||| ||| | ||| || || | || | ||| || Sbjct 234847 CCGTGAGACGGTT---CGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGA 234903 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || || | ||| ||| ||||||| | | |||| |||| ||| ||| || | Sbjct 234904 GACCGGCACACCTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAA 234963 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 || || ||||||||||| ||| ||||||| ||||| | ||||| || |||| || Sbjct 234964 TCTTGGCACCATCAAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGA 235023 Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630 ||| | ||||| || || |||| Sbjct 235024 TGAGGTCGCTGTCTGCAATCTGG 235046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722383706720