Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq100 122 8e-23 seq55 116 4e-21 seq67 98.7 9e-16 >seq100 Length=1030212 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || || ||||| || || ||||| ||| | Sbjct 662418 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 662477 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || || | |||| |||||||| || || || Sbjct 662478 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 662537 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| ||||| | |||| |||||| | |||||| Sbjct 662538 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 662597 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || |||||||| ||||| || || || |||||||| Sbjct 662598 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 662644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || ||||| || || || |||||||| | || || Sbjct 662202 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCG 662261 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| |||| | |||||||| || || || |||||||||||| Sbjct 662262 TCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTG 662321 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| || ||||| |||| |||| ||||| | || ||||||| || | Sbjct 662322 TCTTGGATCTTTGACTTGACGTTG-TCGATCGTGTCGGATGATTCCACTTCGAGTGTGAT 662380 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| || || || || ||||| ||||| Sbjct 662381 GGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 662416 >seq55 Length=447353 Score = 116 bits (128), Expect = 4e-21 Identities = 356/534 (67%), Gaps = 31/534 (6%) Strand=Plus/Minus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATT---GAAA 47115 |||| | ||| || ||| | ||||| ||||| || ||||| || | ||| || | Sbjct 251300 TCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGCGTTGCGATGGATTTCTGACA 251241 Query 47116 ACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCT 47175 | ||| || || || ||| ||| | || || || ||| ||| ||||| |||||| Sbjct 251240 A-GAACTCGACATTC--GCCCTCCGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCT 251184 Query 47176 TCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCA 47235 |||| || ||||| || || || | |||| | || | ||| |||| |||| Sbjct 251183 TCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCA 251124 Query 47236 CGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-C 47294 | || |||||||| ||||| | || || ||| ||||||| |||| ||||| || | Sbjct 251123 CATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTC 251064 Query 47295 TACTACAACACTAGAGTC-GATCAA-AAGTTGGACGTGCCCACCGT-CAGCGACATGTTT 47351 | | || | || || || ||| | || | || || ||| | ||| | Sbjct 251063 TGTT------CTCGCATCTGAAGAACAAGCCGAACCAGGCCCTTGTGCAGAG-CATCATC 251011 Query 47352 GCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG--AATCTTTAG 47409 |||| |||||| | || ||| |||||| || | || ||||| || || ||| Sbjct 251010 ACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTC-- 250953 Query 47410 TGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCG 47469 |||| |||||||| | | ||| | | ||||| ||||| |||||||| ||||| || | Sbjct 250952 TGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACT-G 250894 Query 47470 TTCAGCTAAAGTATCC--CAAGA---TTTACCACACCGAGAATCCATTCGAGTTTATGAA 47524 || ||| | | | ||||| | ||| || || || || ||||| || ||| | Sbjct 250893 TT-AGC---ACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGA 250838 Query 47525 CAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||||||||||| | |||||||||||||| ||||||||||| || ||||| || Sbjct 250837 GAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 250784 >seq67 Length=1513308 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | |||||| ||| || | ||| ||||||||| ||||| Sbjct 1106102 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 1106161 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 || |||||||| || || || || |||||||||||| ||| || ||||| | ||| Sbjct 1106162 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 1106221 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| |||| || | || ||||| || || || ||||| || Sbjct 1106222 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 1106280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500015423680