Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq38 268 1e-66 seq55 111 2e-19 seq67 109 7e-19 >seq38 Length=777079 Score = 268 bits (296), Expect = 1e-66 Identities = 905/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Plus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || |||| || ||||||||||| ||||| | | | |||||| Sbjct 234215 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 234274 Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || | ||||| | ||| |||| || || | ||||| || |||| ||||| Sbjct 234275 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 234333 Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796 ||| ||| || | | | | ||| || ||| | | || | ||||| || || Sbjct 234334 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 234390 Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856 |||| || |||| || |||| ||||||| ||||| ||| ||||| ||||| Sbjct 234391 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 234450 Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914 || | || | || | |||| |||| || ||| || || | || ||||| || Sbjct 234451 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 234508 Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974 ||| | ||| || | |||||||| || || | |||| ||| || || || || || Sbjct 234509 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 234568 Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028 || | ||| ||||| || | | || | || |||| |||||||| ||||| || Sbjct 234569 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 234625 Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 234626 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 234684 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 234685 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 234744 Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 || |||| |||| | || || || || || || ||||| || |||| ||||| | Sbjct 234745 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 234803 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266 |||| | | || ||| || ||| |||| | || || |||||| | | Sbjct 234804 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234863 Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 || | | ||| | ||||||||| || | || |||||||| || ||||| | || | Sbjct 234864 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234923 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 234924 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 234983 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 | || | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 234984 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 235043 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 235044 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 235103 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 |||| ||||| || || ||| |||||| ||||| |||| || || | || | Sbjct 235104 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 235163 Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 235164 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 235222 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684 ||| | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 235223 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 235281 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||||| | ||| | || |||||||| || ||||| || ||||||||||| | Sbjct 235282 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 235341 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 ||| | || ||| ||||| || || || | || ||||||| || || || Sbjct 235342 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 235401 Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861 | ||| || | || ||||||| ||| | ||| | || || ||||||| ||| Sbjct 235402 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 235458 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 ||||||| ||| || | ||| | || ||| ||| | | || || ||||| Sbjct 235459 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 235518 Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981 ||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | || Sbjct 235519 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 235578 Query 112982 CATCTA 112987 ||| || Sbjct 235579 CATTTA 235584 >seq55 Length=447353 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 251220 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 251162 Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 251161 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 251102 Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| | ||| ||| || || Sbjct 251101 CCGTGATGAGGGCATGCACACAGACTTCGC 251072 >seq67 Length=1513308 Score = 109 bits (120), Expect = 7e-19 Identities = 224/325 (69%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 629838 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 629779 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 629778 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 629720 Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908 | || |||| ||| ||| || | ||| || || ||||| || ||||| | Sbjct 629719 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 629662 Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968 ||| || ||||| ||||||||||| | | || | || |||| | || ||| Sbjct 629661 ATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCA 629602 Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028 | || ||| ||||| ||||| ||||||| |||||| || |||||| || || Sbjct 629601 AGAGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTG--TGACCGT 629544 Query 177029 GC--CGTACCCGCCTTGTTCGCATC 177051 | |||||| |||||||| || || Sbjct 629543 CCTTCGTACCGGCCTTGTTGGCGTC 629519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741375775040