Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq121 224 1e-53 seq100 156 6e-33 seq70 147 3e-30 seq63 91.5 2e-13 >seq121 Length=888912 Score = 224 bits (248), Expect = 1e-53 Identities = 470/698 (67%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| || |||||||| || || || || ||||| || || ||| | | | Sbjct 293086 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGA 293027 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 ||||||| | ||||| ||| | || || || || ||||| ||||| || || | ||| Sbjct 293026 GATGATCGCATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 292967 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| ||||| | || ||||| | || ||||| || || || ||| || |||||| Sbjct 292966 GCCTTCACAGACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAAC 292907 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || || || ||||| ||||| ||||| | || || |||||||| || | Sbjct 292906 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 292847 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 || |||| ||||| ||| ||| | | | ||| | || | | || | ||||| Sbjct 292846 GTGCAAGCAGATATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCA 292790 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || || || || | || ||| |||| || || | || || || || || | Sbjct 292789 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 292730 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| ||||| || || || | | | ||| || || || | Sbjct 292729 ATGATTCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 292670 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || || || || || || |||| || || || ||||| || || |||||||| Sbjct 292669 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCC 292610 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||||| || || ||| || | || ||||| || || || || || || ||| Sbjct 292609 GGCCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATT 292550 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| | || | || ||||| | ||||| ||||| ||| Sbjct 292549 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 292490 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| | Sbjct 292489 GGTGGTACCTTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCC 292430 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||||| | |||||||| || ||||| Sbjct 292429 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGA 292392 >seq100 Length=1030212 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || || |||||||||||||||||||| ||||| ||||| || | || | Sbjct 662848 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 662789 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||||||||||||||| || |||||||| | ||||| || || || Sbjct 662788 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 662729 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || ||||| | || |||||| |||| |||||| ||||| || Sbjct 662728 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 662669 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 662668 CTCGTCCTCCGTCTTCGTGGTGGT 662645 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || |||||||||||||| |||| Sbjct 662649 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 662590 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || |||| | ||||| || || ||||| || || ||||| | Sbjct 662589 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 662530 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || |||||||| || || ||||| || ||||| ||||| || | || | Sbjct 662529 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACT 662470 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || || || || ||||| ||| | || || | || || |||||| Sbjct 662469 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 662417 >seq70 Length=207566 Score = 147 bits (162), Expect = 3e-30 Identities = 196/272 (72%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || |||||||||| ||| || |||| || || |||||||||| ||| || Sbjct 20987 ACCGTCCCAGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 21046 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || ||||| || ||||| || || |||||| Sbjct 21047 GCCGGACTCAACGTTCTCCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 21106 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| | || ||| || | |||| ||||| ||||||||| Sbjct 21107 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 21166 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | ||| | || ||| | ||| || |||||||| ||| Sbjct 21167 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 21226 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || ||| | |||||| | |||||||| Sbjct 21227 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 21258 Score = 107 bits (118), Expect = 3e-18 Identities = 251/375 (67%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118 ||||| ||||| || | || || || || |||||||| |||||||| || | |||| Sbjct 21438 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 21495 Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178 ||||||| | | || || ||||| | || || || || ||| | || | || | Sbjct 21496 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 21555 Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236 ||||||| ||||| || || | ||| | | || | || | || | || || Sbjct 21556 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 21613 Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 || || || || |||||| || || ||| |||||||| || || || ||||| Sbjct 21614 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATCGTGCTTGT 21673 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||||| || || | || || ||||||||| || Sbjct 21674 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 21733 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | | || | |||||||| ||||| || || || ||||| || ||||||||||| Sbjct 21734 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATATGGGGCCGCCGTTCAGGC 21793 Query 196417 TGCTATTCTCTCAGG 196431 | ||| ||||| || Sbjct 21794 CGGTATCCTCTCTGG 21808 >seq63 Length=330749 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/331 (67%), Gaps = 13/331 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || || | | | || ||| || | | ||||| || || Sbjct 130796 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 130737 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || || || |||||||||| | || || Sbjct 130736 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 130677 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| ||||| || || || || | || || || || Sbjct 130676 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 130617 Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||||| ||||||| || |||| | ||| ||| || ||||||||||||| Sbjct 130616 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTCGGTGGTGGTA 130565 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| | | | | | || ||| | ||||| || |||| || || | Sbjct 130564 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 130505 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || ||||| |||||||| || ||||| Sbjct 130504 GTGACACCCATCTTGGTGGTGAGGACTTCGA 130474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861314527040