Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq47 111 1e-19 >seq47 Length=564556 Score = 111 bits (122), Expect = 1e-19 Identities = 196/286 (69%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 ||||||| ||||| | || ||| || | || |||||| |||||| ||||| || Sbjct 67522 CAGTCTCGGGGTTCTTGCAGTCCTTGCAGAGGACGAACTTGTTGATGAAGCCATCGAGGT 67581 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||| || ||||| | || || | ||||||| ||| | || |||| ||| | Sbjct 67582 AGTCTTGCAACTTGGTAGCCTCATGTGCACCGTTGATGATCCAGCGGTCGTCCTTGGGGT 67641 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 | | | || || ||||| |||||| | || |||||||| | || | | ||| | Sbjct 67642 CAATATTGGTCTGGGCGCCGAGCTCGAAACCAAAGTACTTGATGACATAGCTTGGCGGGC 67701 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | | ||| | |||| | || || ||||||| |||||||||||| ||||| |||| Sbjct 67702 GGGCGAGCTGGTAAGCGACGTTGGCCAGATTGACGACGACAGTCTTGATACCGTTACCCT 67761 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 | || || ||||||| ||||||| ||| |||||||||||||| Sbjct 67762 TCCCCTCTACCTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAA 67807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840935841076