Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq40 156 7e-32 seq55 143 4e-28 seq78 118 2e-20 seq38 89.7 8e-12 seq111 86.0 1e-10 >seq40 Length=683906 Score = 156 bits (172), Expect = 7e-32 Identities = 177/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| ||| Sbjct 125575 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 125516 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| ||||||| |||||||| ||||| | ||| || |||||| || | Sbjct 125515 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 125457 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||||| ||| ||| |||| ||||||||||| || ||||||| Sbjct 125456 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 125397 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| ||||| | ||||||||| || ||| ||||| ||||||||||| || Sbjct 125396 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 125342 >seq55 Length=447353 Score = 143 bits (158), Expect = 4e-28 Identities = 321/480 (67%), Gaps = 4/480 (1%) Strand=Plus/Minus Query 2018914 TCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACG 2018973 |||| || | |||||||||||||| | ||||||||||| || |||||| | Sbjct 47048 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 46989 Query 2018974 CCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGG 2019033 || | | |||||| | ||| |||||||||||||| || | | | ||| Sbjct 46988 CCATCGAACGCCTCAAAATCATCGCCAAAGACGGCAACATGCCACACGTAATCATCTCGG 46929 Query 2019034 GCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCG 2019093 || |||||| | ||||| ||||| || ||||| |||||| ||||| |||| Sbjct 46928 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCG 46869 Query 2019094 CGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCG 2019153 | ||| | | || ||||| ||||||||||| || || ||||||||||| | ||||||| Sbjct 46868 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCGGACGAGCGCGGAATCGACGTCG 46809 Query 2019154 TGCGTAGAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCA 2019211 | || | ||||| || || ||| ||||| || || || ||| || || Sbjct 46808 TACGAAACCGAATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGACGGGCGGCA 46751 Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271 ||| | | || || ||||| || || || | || || | || |||||||| || || Sbjct 46750 GAAGATTGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCG 46691 Query 2019272 ATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTC 2019331 || ||||||| |||| || |||||| || || || | || || ||| ||| Sbjct 46690 CCGAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGTAACCAATCGAA 46631 Query 2019332 GATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGA 2019391 | ||||||| | ||||| || ||||| ||||| |||| ||||| |||||||| Sbjct 46630 CAAAATCATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCGA 46571 Score = 122 bits (134), Expect = 1e-21 Identities = 177/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| |||||||| || ||| |||||| |||||||||||||| | | Sbjct 250767 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 250826 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | |||| ||||| | |||| Sbjct 250827 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 250886 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | || ||||| |||||||||||||||||||| || |||||||| | ||||||| Sbjct 250887 GTGCTAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 250946 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || | ||| || || | || | | ||||| | ||||||| |||||||| Sbjct 250947 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 251006 Query 794131 CGATGATGAT 794140 || ||||||| Sbjct 251007 CGGTGATGAT 251016 >seq78 Length=1471894 Score = 118 bits (130), Expect = 2e-20 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691 || ||| | |||||||||||||||||| | || |||||| | || ||||| | || ||| Sbjct 1324019 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 1324078 Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751 ||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || ||| Sbjct 1324079 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 1324138 Query 2035752 ATCAAGTACG 2035761 || || ||| Sbjct 1324139 ATTCAGAACG 1324148 >seq38 Length=777079 Score = 89.7 bits (98), Expect = 8e-12 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661 ||||||| || || ||||| | | ||| || || | ||| |||||||| ||| ||| Sbjct 235625 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 235566 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721 | ||| | |||| | ||||| ||||||||| |||| ||| || ||||| |||| Sbjct 235565 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 235507 Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 ||||| ||||||||||||| |||| || | || | || || || ||| ||||||| Sbjct 235506 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 235448 Query 2069781 CCAGCGGCCG 2069790 |||| || || Sbjct 235447 CCAGAGGTCG 235438 >seq111 Length=895597 Score = 86.0 bits (94), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369 |||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| |||| Sbjct 725958 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 725899 Query 2175370 CATAGGCGCGCATGA 2175384 |||||||||||||| Sbjct 725898 GATAGGCGCGCATGA 725884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916232358557948