Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236575.1_202017-07- 28] 132 sequences; 30,154,641 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq100 159 7e-34 seq67 120 6e-22 seq57 116 8e-21 seq56 111 3e-19 seq55 109 1e-18 >seq100 Length=1030212 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| || | || |||||| |||||||||||||| | Sbjct 662417 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 662476 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || ||||| |||| || || |||||| || Sbjct 662477 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 662536 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| | ||||| Sbjct 662537 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGAC 662596 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 662597 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 662644 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | ||| || || ||||||||||| || | | Sbjct 662190 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 662249 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 662250 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 662309 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||||| || ||| | ||||| ||||| || | ||| ||| Sbjct 662310 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 662369 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 662370 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 662416 Score = 129 bits (142), Expect = 1e-24 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||||| || || || ||||||||||| | Sbjct 662645 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGA 662704 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || || ||||| ||||| |||||| || Sbjct 662705 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGG 662764 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || ||||| || |||||| ||||| || || | ||||| ||||| || | || | Sbjct 662765 AATGCCTTCCTTATCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAA 662823 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | ||||| || || ||||| || || Sbjct 662824 CCTCGAGGGTAATGGTCTTGCCGGT 662848 >seq67 Length=1513308 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || ||||| |||||||| | || || || || |||||| Sbjct 1106102 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 1106161 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 ||||| || ||||| || || ||||||||||| |||||| ||||| || || | || Sbjct 1106162 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 1106220 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | ||||| ||||| ||||| ||||| || || | ||||| ||||| Sbjct 1106221 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 1106280 >seq57 Length=417519 Score = 116 bits (128), Expect = 8e-21 Identities = 111/141 (79%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || || ||||||||||| | Sbjct 229584 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 229643 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| |||||||| || || ||||| || Sbjct 229644 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 229703 Query 282992 AATACCCTCCTTGTCT-TGGA 283011 ||| |||||||||||| |||| Sbjct 229704 AATTCCCTCCTTGTCTGTGGA 229724 >seq56 Length=1579955 Score = 111 bits (122), Expect = 3e-19 Identities = 251/377 (67%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 312486 CGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATCG 312545 || |||||| | | | | ||||| || || |||||| |||| || | || ||| ||| Sbjct 273695 CGTCCCCACATCAAAGCCTTGACGATCGAGGCGAAGTTGTCGTCCATCAAAATGATGTCG 273636 Query 312546 GCTGCTTCCTTTGCAATGTCTGT---ACCACTCCCCATTGCACACCCGACGTCTGCTTCC 312602 | ||||||||||| | ||||| | || | ||| ||| ||||||| || || || Sbjct 273635 GAGGCTTCCTTTGCGACTTCTGTGCCAGCAATGTTCATGGCAAACCCGACATCAGCAGCC 273576 Query 312603 TTAAGAGCCGGGGCGTCGTTAGCACCATCGCCACTCGATGCGACGACGTGGCCAAGGGCC 312662 || || || || |||||||| | |||||| ||| | |||||| | ||| | | Sbjct 273575 TTTAGGGCAGGAGCGTCGTTGGTACCATCTCCAGTGACAGCGACGGTCTCGCCCATCTCT 273516 Query 312663 TTCATGAGCTGAACCAACTTATACTTATCCTCTGGGGATGAACGGGCAAGAACTTTCAGC 312722 |||| | ||| ||||| | | ||| || || || || || || || ||||| | ||| Sbjct 273515 TTCAGGCGCTTGACCAAGGTCTTCTTGTCGTCGGGAGAAGATCGCGCGAGAACCTGCAGT 273456 Query 312723 TTAGGTGCGATGGCAACCTGTTCATCGTTACTCATTGCCCGGAATTCCTTACCTTCAATG 312782 || || ||| || ||| ||| || ||||| ||||||||| |||||| | Sbjct 273455 TTTGGAATGATAGCCTTCTGCTCAGTCTTGCTCATCTTGCGGAATTCCGGACCTTCGAGT 273396 Query 312783 GCGATATCCCCGTGCTTCAGCATACCGATTTCACTGGCAATGTGCTTCGCCGTCTGGATG 312842 || | | | || | | | || || || ||||||| ||| |||||| | ||| Sbjct 273395 GCAACACCACCTGGGGTGAAGATGCCACACTCGGTGGCAATAGCCTTTGCCGTCAGAATG 273336 Query 312843 TTATCACCGGTAACCAT 312859 || || || |||||||| Sbjct 273335 TTGTCTCCAGTAACCAT 273319 >seq55 Length=447353 Score = 109 bits (120), Expect = 1e-18 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| ||| ||| | || ||||| |||| |||||| Sbjct 250988 AGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGT 250929 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||||| || |||||||| || ||||| | | | || || || || |||| | | Sbjct 250928 CACAATACATTGAATTCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTCT 250869 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| |||||||||| || |||||| |||||| || || || || |||| Sbjct 250868 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACT 250809 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| |||||||| |||| || || | | | ||||| Sbjct 250808 TCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGTGT 250769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737429702328