Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07-
28] 218 sequences; 30,882,610 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq133 167 3e-36
>seq133
Length=486135
Score = 167 bits (184), Expect = 3e-36
Identities = 628/972 (65%), Gaps = 26/972 (3%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| |||||||| || || || ||||||| | | | | || | || || ||||||||
Sbjct 413978 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 414037
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
| ||| | ||| ||||| || | ||| | ||||| ||||| ||| || |||
Sbjct 414038 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 414097
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC- 79799
|| || |||||||| || || || || || |||| | || | ||| || | ||| |
Sbjct 414098 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 414157
Query 79800 ----GA-CTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854
|| | ||| || | | | | | | | |||||| || || | ||
Sbjct 414158 TTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGCTCGTAC 414211
Query 79855 AA-TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| || || ||||||||| || ||||||| | ||||| ||||||| || |||||
Sbjct 414212 AGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACAT 414270
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
|| | ||| || | | | || || | |||||||||||| |||||||| |||||
Sbjct 414271 CAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGC 414330
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| | ||| | | | | || || ||||| ||||| ||| || | |||
Sbjct 414331 GTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAA 414390
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| ||| | || | ||||||||| || | ||| ||||| | | | || || || |||||
Sbjct 414391 CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTT 414450
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | || |||
Sbjct 414451 GCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACC 414510
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTG 80212
|||||||| || || || ||| || || || |||| | || || || ||
Sbjct 414511 GTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATG 414570
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| ||||| || || || || | || ||||| | || ||| || | ||||| ||||
Sbjct 414571 A-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 414629
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || ||||| ||||| ||||| | | || ||| || | | || || |
Sbjct 414630 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCC 414685
Query 80333 T----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-G 80387
| || || ||| | || | || || ||||| || || || | || |||| |
Sbjct 414686 TGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATG 414745
Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447
||| ||||| |||||||| |||| ||| || || |||||| || || || |||||
Sbjct 414746 TAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACG 414804
Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507
||| | ||| || || ||||| || | | |||| | ||| | | | ||| |||
Sbjct 414805 CATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCG 414864
Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567
|||| ||| || || || || || | ||| ||||| || || || | ||| ||||
Sbjct 414865 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGA 414924
Query 80568 GTTGAGTTTATC 80579
||| || | |||
Sbjct 414925 GTTCAGCTCATC 414936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718266842717520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |