Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236585.1_202017-07-
28] 218 sequences; 30,882,610 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq207 206 5e-48
seq185 141 2e-28
seq142 125 1e-23
seq76 89.7 9e-13
>seq207
Length=763741
Score = 206 bits (228), Expect = 5e-48
Identities = 182/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || |||| |||||||| || |||||||| || |||||||| ||||| ||
Sbjct 54394 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 54453
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||||| || || || | |||||| |||||||| ||||| | || ||||| |||||
Sbjct 54454 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 54513
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| |||
Sbjct 54514 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 54573
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||| ||||||||||| || |||||
Sbjct 54574 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 54620
Score = 156 bits (172), Expect = 8e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || || ||||| |||||||| || |||||
Sbjct 54622 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 54681
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || ||||| |||||
Sbjct 54682 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 54741
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| || ||||| | |||||| ||||||||||| ||| || || ||
Sbjct 54742 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 54800
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||| ||||||||||| ||||||||
Sbjct 54801 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 54848
Score = 104 bits (114), Expect = 4e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | || || ||| ||| || || ||||| || |||||
Sbjct 54850 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 54909
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | | ||| ||||| ||||||
Sbjct 54910 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 54969
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| || || ||||| ||| || ||||||||||| | || || ||
Sbjct 54970 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 55029
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||| ||||| || || ||||
Sbjct 55030 TCGAGGGTAATGGTCTTGCCGGTGA 55054
>seq185
Length=938846
Score = 141 bits (156), Expect = 2e-28
Identities = 300/441 (68%), Gaps = 10/441 (2%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || |||||||||||||| || || |||||||||||||| |||||| |
Sbjct 319829 CATGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 319888
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC---GCCAAACTGCTTGGGGTA 10051
|| |||||| |||||||||||| |||||||| ||| | |||| ||| ||
Sbjct 319889 CAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTT---GTT 319945
Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111
|||||||| | | ||| || || ||||| || ||||| || ||| ||| | |
Sbjct 319946 GCCGAGTGCCAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGC 320005
Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||| || | | ||| || | ||||| | ||| |||| ||| | | |||
Sbjct 320006 GTTCATCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGAC 320065
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| || || |||||||| || | | | || | ||||||||| || | ||| |
Sbjct 320066 GGCCTCGGTGATGATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAA 320125
Query 10232 CAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
||| || | || | ||| ||| | |||||| || ||| ||||| |||||| || |
Sbjct 320126 CAGAAGGCAGGCGAAGT-CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGA 320184
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCG 10349
| || |||| |||||| || || || ||||||||| || || ||| || || ||
Sbjct 320185 ATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA-AAAGATCCA 320243
Query 10350 GAGAACAGAAGACCCTCCACG 10370
||||| | | |||||| |||
Sbjct 320244 GAGAAGAAGATACCCTCAACG 320264
>seq142
Length=380217
Score = 125 bits (138), Expect = 1e-23
Identities = 142/188 (76%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 68266 TGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGG 68325
|| || | || |||||||| || |||||||| || | ||||| || |||||||| || |
Sbjct 250786 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 250727
Query 68326 CGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGA 68385
|||| || | | || ||||| ||||| || || |||||||| || ||||| |||||
Sbjct 250726 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 250667
Query 68386 CGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
| ||||||||||| ||| || || || || | |||||||| || || |||||||||
Sbjct 250666 CATTGTCGATGGTGTC-GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 250608
Query 68445 TTGACGAA 68452
|| |||||
Sbjct 250607 TTTACGAA 250600
>seq76
Length=518018
Score = 89.7 bits (98), Expect = 9e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 224979 ACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAG 225038
|||||||||||||||| | | |||||| | || || |||| || || || |||||
Sbjct 123786 ACCGCCACTGGATGTATTCGGACGGGGTCTTCTCGAGATGGTGGTCGATGTGCGCGAAAG 123727
Query 225039 CATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC- 225097
| ||||| | ||| || || || ||||| |||| | || ||| ||||
Sbjct 123726 CGTGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTATACGTCGCCGGCAGTCG 123667
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| || | ||| || || ||||| |||| ||| |||| |||||| |||||||| || |||
Sbjct 123666 GGATGAG-CTCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCGGCACCATTTGGCCCA 123608
Query 225158 ATCACGCCAATCCGGGAT 225175
|| ||| |||| || |||
Sbjct 123607 ATGACGGCAATACGAGAT 123590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619888578960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |